BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031091
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   103   1e-20
emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]   103   1e-20
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   103   2e-20
ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab...   102   2e-20
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...    96   3e-18

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = -2

Query: 230 NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 51
           + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+PE  +P EY+RANKELRK+RSS+E
Sbjct: 13  STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 71

Query: 50  LITDLRSKQKEIDGLK 3
            IT+LR+KQKEIDGLK
Sbjct: 72  HITELRNKQKEIDGLK 87


>emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = -2

Query: 230  NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 51
            + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+PE  +P EY+RANKELRK+RSS+E
Sbjct: 1196 STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 1254

Query: 50   LITDLRSKQKEIDGLK 3
             IT+LR+KQKEIDGLK
Sbjct: 1255 HITELRNKQKEIDGLK 1270


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
           gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
           thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
           release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = -2

Query: 260 NGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 81
           + N+ R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRANK
Sbjct: 33  SSNMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPE-YSPEEFSRANK 89

Query: 80  ELRKIRSSMELITDLRSKQKEIDGLK 3
           ELRK+R SM LI DLR+KQKEIDGLK
Sbjct: 90  ELRKLRDSMLLINDLRAKQKEIDGLK 115


>ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein
           ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = -2

Query: 263 RNGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRAN 84
           R+  + R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRAN
Sbjct: 29  RSSKMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNALLQKLINQPE-YSPEEFSRAN 85

Query: 83  KELRKIRSSMELITDLRSKQKEIDGLK 3
           KELRK+R SM LI DLR+KQKEIDGLK
Sbjct: 86  KELRKLRDSMFLINDLRAKQKEIDGLK 112


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/78 (62%), Positives = 62/78 (79%)
 Frame = -2

Query: 236 STNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSS 57
           S + E   QLS +L+ IME RL AIE+R +CL NF+NQPE  +PSEY+RANKELRK+  S
Sbjct: 41  SYSAEVPAQLSPELLNIMEQRLSAIEYRTSCLNNFLNQPEA-SPSEYARANKELRKLSGS 99

Query: 56  MELITDLRSKQKEIDGLK 3
           ++LI +LR+KQKEIDGLK
Sbjct: 100 VDLIKELRAKQKEIDGLK 117