BLASTX nr result
ID: Coptis25_contig00031091
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031091 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V... 103 1e-20 emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera] 103 1e-20 ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha... 103 2e-20 ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab... 102 2e-20 ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li... 96 3e-18 >ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera] gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 103 bits (257), Expect = 1e-20 Identities = 54/76 (71%), Positives = 65/76 (85%) Frame = -2 Query: 230 NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 51 + E QPQLSTDLI IME RL AIEHR+ LQ+F+N+PE +P EY+RANKELRK+RSS+E Sbjct: 13 STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 71 Query: 50 LITDLRSKQKEIDGLK 3 IT+LR+KQKEIDGLK Sbjct: 72 HITELRNKQKEIDGLK 87 >emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera] Length = 1542 Score = 103 bits (257), Expect = 1e-20 Identities = 54/76 (71%), Positives = 65/76 (85%) Frame = -2 Query: 230 NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 51 + E QPQLSTDLI IME RL AIEHR+ LQ+F+N+PE +P EY+RANKELRK+RSS+E Sbjct: 1196 STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 1254 Query: 50 LITDLRSKQKEIDGLK 3 IT+LR+KQKEIDGLK Sbjct: 1255 HITELRNKQKEIDGLK 1270 >ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana] gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana] gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 413 Score = 103 bits (256), Expect = 2e-20 Identities = 56/86 (65%), Positives = 66/86 (76%) Frame = -2 Query: 260 NGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 81 + N+ R ++T E PQLS DLIKIM+ RL AIEHRN LQ +NQPE +P E+SRANK Sbjct: 33 SSNMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPE-YSPEEFSRANK 89 Query: 80 ELRKIRSSMELITDLRSKQKEIDGLK 3 ELRK+R SM LI DLR+KQKEIDGLK Sbjct: 90 ELRKLRDSMLLINDLRAKQKEIDGLK 115 >ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] Length = 410 Score = 102 bits (255), Expect = 2e-20 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = -2 Query: 263 RNGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRAN 84 R+ + R ++T E PQLS DLIKIM+ RL AIEHRN LQ +NQPE +P E+SRAN Sbjct: 29 RSSKMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNALLQKLINQPE-YSPEEFSRAN 85 Query: 83 KELRKIRSSMELITDLRSKQKEIDGLK 3 KELRK+R SM LI DLR+KQKEIDGLK Sbjct: 86 KELRKLRDSMFLINDLRAKQKEIDGLK 112 >ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max] Length = 415 Score = 95.9 bits (237), Expect = 3e-18 Identities = 49/78 (62%), Positives = 62/78 (79%) Frame = -2 Query: 236 STNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSS 57 S + E QLS +L+ IME RL AIE+R +CL NF+NQPE +PSEY+RANKELRK+ S Sbjct: 41 SYSAEVPAQLSPELLNIMEQRLSAIEYRTSCLNNFLNQPEA-SPSEYARANKELRKLSGS 99 Query: 56 MELITDLRSKQKEIDGLK 3 ++LI +LR+KQKEIDGLK Sbjct: 100 VDLIKELRAKQKEIDGLK 117