BLASTX nr result

ID: Coptis25_contig00031083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031083
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194634.1| concanavalin A-like lectin kinase-like protein ...   186   3e-45
ref|XP_002867426.1| hypothetical protein ARALYDRAFT_353897 [Arab...   179   4e-43
ref|XP_002534540.1| carbohydrate binding protein, putative [Rici...   174   1e-41
ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]             172   5e-41

>ref|NP_194634.1| concanavalin A-like lectin kinase-like protein [Arabidopsis
           thaliana] gi|75337901|sp|Q9SZD5.1|LRK59_ARATH RecName:
           Full=L-type lectin-domain containing receptor kinase
           V.9; Short=LecRK-V.9; Flags: Precursor
           gi|4972051|emb|CAB43919.1| serine/threonine-specific
           kinase like protein [Arabidopsis thaliana]
           gi|7269803|emb|CAB79663.1| serine/threonine-specific
           kinase like protein [Arabidopsis thaliana]
           gi|332660179|gb|AEE85579.1| concanavalin A-like lectin
           kinase-like protein [Arabidopsis thaliana]
          Length = 669

 Score =  186 bits (472), Expect = 3e-45
 Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 5/197 (2%)
 Frame = -3

Query: 577 LMFLILILIGKQMKSYNAQDNFVFNGFL-ESAGGASVGTSSPVTLTNSESYKAGRVFYSF 401
           ++ L+L     +  S + +  F FNG+L +++G A   +   + LTNS  +  G VFY+ 
Sbjct: 7   VLLLVLQFFSNKALSQSEEGEFGFNGYLYDNSGIAITNSKGLMKLTNSSEFSYGHVFYNS 66

Query: 400 PLSFKNSTNASVNSFSTTFIFKIASR----NGQGIAFAVSPTKDFSTAIPSQYLGLFNVT 233
           P+ FKNS N +V+SFSTTF+F I S     +G G+AF +SPTK    +  SQYLGLFN+T
Sbjct: 67  PVRFKNSPNGTVSSFSTTFVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLFNLT 126

Query: 232 GMGDPANHIVAVEFDVAQNPEFNDINDNHVGIDINGLESNISISAGYFNDDDGKFRAINL 53
             GDP+NHIVAVEFD  QN EF+D+++NHVGIDIN L S  + +AGY+ DDDG F+ I L
Sbjct: 127 NNGDPSNHIVAVEFDTFQNQEFDDMDNNHVGIDINSLSSEKASTAGYYEDDDGTFKNIRL 186

Query: 52  KSGDPILVWVEYNGTEK 2
            +  PI  W+EY+ + +
Sbjct: 187 INQKPIQAWIEYDSSRR 203


>ref|XP_002867426.1| hypothetical protein ARALYDRAFT_353897 [Arabidopsis lyrata subsp.
           lyrata] gi|297313262|gb|EFH43685.1| hypothetical protein
           ARALYDRAFT_353897 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  179 bits (453), Expect = 4e-43
 Identities = 95/202 (47%), Positives = 136/202 (67%), Gaps = 11/202 (5%)
 Frame = -3

Query: 574 MFLILILIGKQMKSYNA------QDNFVFNGFL-ESAGGASVGTSSPVTLTNSESYKAGR 416
           +F++++L+  Q  S  A      +  F FNG+L  S G A++ ++  + L+N    K G+
Sbjct: 3   LFVLVLLLLLQFSSNKAVSESEEEGEFGFNGYLYNSYGTANLDSNGLLKLSNYTVQKTGQ 62

Query: 415 VFYSFPLSFKNSTNASVNSFSTTFIFKIASR----NGQGIAFAVSPTKDFSTAIPSQYLG 248
           VFY+ P+ FKNS NA+V+SFSTTF+F I S+    +G GIAFA+ PTK    A PSQYLG
Sbjct: 63  VFYNLPVRFKNSPNATVSSFSTTFVFAIVSQIPTLSGHGIAFAICPTKGLPYATPSQYLG 122

Query: 247 LFNVTGMGDPANHIVAVEFDVAQNPEFNDINDNHVGIDINGLESNISISAGYFNDDDGKF 68
           LFN++  G+ +NH+VAVEFD  Q+ EF DI+DNHVGIDIN L S  + +AGY+ +DDG F
Sbjct: 123 LFNISNNGNFSNHVVAVEFDTIQSTEFRDIDDNHVGIDINSLRSEKAYTAGYY-EDDGTF 181

Query: 67  RAINLKSGDPILVWVEYNGTEK 2
           + ++L +  PI  W+EY+ + K
Sbjct: 182 KNMSLINRKPIQAWIEYDSSRK 203


>ref|XP_002534540.1| carbohydrate binding protein, putative [Ricinus communis]
           gi|223525085|gb|EEF27844.1| carbohydrate binding
           protein, putative [Ricinus communis]
          Length = 657

 Score =  174 bits (440), Expect = 1e-41
 Identities = 98/198 (49%), Positives = 125/198 (63%), Gaps = 4/198 (2%)
 Frame = -3

Query: 589 MRIPLMFLILILIGKQMKSYNAQDNFVFNGFLESAGGASVGTSSPVTLTNSESYKAGRVF 410
           M  PL   +LI +   +        F FNG +E  G A V T+    LT++ S+  G VF
Sbjct: 5   MLFPLCLAVLIRVAAGISG-----GFTFNGNIELQGVAEVSTNGLFRLTDTTSFTVGHVF 59

Query: 409 YSFPLSFKNSTNASVNSFSTTFIFKI----ASRNGQGIAFAVSPTKDFSTAIPSQYLGLF 242
           Y+ PL+FKNS++    SFSTTF+  I    +S NG G+AF ++P+K+ S A  +Q LGLF
Sbjct: 60  YAQPLTFKNSSSGKALSFSTTFVIAIVVDKSSLNGHGMAFVIAPSKELSGA-SAQNLGLF 118

Query: 241 NVTGMGDPANHIVAVEFDVAQNPEFNDINDNHVGIDINGLESNISISAGYFNDDDGKFRA 62
           N T  GDP+N IVAVEFD  QN EFNDINDNHVGIDIN L S  S  A YF D  G+F+ 
Sbjct: 119 NRTNDGDPSNRIVAVEFDNFQNQEFNDINDNHVGIDINSLTSVDSAPAAYFVDATGEFKN 178

Query: 61  INLKSGDPILVWVEYNGT 8
           I+L SG+ I VWV+Y+ T
Sbjct: 179 ISLASGERIQVWVDYDAT 196


>ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|222841360|gb|EEE78907.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  172 bits (437), Expect = 3e-41
 Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 4/177 (2%)
 Frame = -3

Query: 523 QDNFVFNGFLESAGGASVGTSSPVTLTNSESYKAGRVFYSFPLSFKNSTNASVNSFSTTF 344
           ++ FVFNG  +  G A +       LTNS ++  GR F+S PLSFKNS+N +  SFSTTF
Sbjct: 9   ENGFVFNGNFDLGGVAELSQKGLFRLTNSSTFGIGRAFFSQPLSFKNSSNGTSVSFSTTF 68

Query: 343 IFKIASRNGQ----GIAFAVSPTKDFSTAIPSQYLGLFNVTGMGDPANHIVAVEFDVAQN 176
           +F      G+    G+AF ++P+K+ + A  +Q+LGLFN+T  GDP+NH+VA+E D  QN
Sbjct: 69  VFAFVVDQGRLPGHGMAFMIAPSKNLTGASSAQHLGLFNLTNNGDPSNHVVAIELDTFQN 128

Query: 175 PEFNDINDNHVGIDINGLESNISISAGYFNDDDGKFRAINLKSGDPILVWVEYNGTE 5
            EFNDIN NHVGID+N LES  S  AGYF++++ +F+ + L S +P+  WVEY+  E
Sbjct: 129 QEFNDINGNHVGIDVNSLESVKSAPAGYFDNENREFKNLVLSSEEPMQAWVEYDAPE 185


>gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]
          Length = 641

 Score =  172 bits (435), Expect = 5e-41
 Identities = 89/179 (49%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
 Frame = -3

Query: 514 FVFNGF----LESAGGASVGTSSPVTLTNSESYKAGRVFYSFPLSFKNSTNASVNSFSTT 347
           F++NGF    L   G A + ++  + LTN    + G  FY  P+ FKNSTN SV SFS+T
Sbjct: 24  FIYNGFRSANLNLDGIAELTSNGLLKLTNKTVQETGHAFYPHPVDFKNSTNGSVFSFSST 83

Query: 346 FIFKIASR----NGQGIAFAVSPTKDFSTAIPSQYLGLFNVTGMGDPANHIVAVEFDVAQ 179
           F+F I       +G GIAF ++PTK    ++PSQYLGLFN +  G+  NH+VAVE D  +
Sbjct: 84  FVFAILPEYPTLSGHGIAFVIAPTKGLPGSLPSQYLGLFNGSNNGNDTNHVVAVELDTIR 143

Query: 178 NPEFNDINDNHVGIDINGLESNISISAGYFNDDDGKFRAINLKSGDPILVWVEYNGTEK 2
           + EF+DINDNHVGIDINGL+S  S  AGY+ DD   F+ + L SG  + VWVEY+G EK
Sbjct: 144 STEFDDINDNHVGIDINGLKSPTSSPAGYYEDDSHDFKNLTLISGKQMQVWVEYHGLEK 202


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