BLASTX nr result

ID: Coptis25_contig00031082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031082
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                160   8e-38
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]   149   2e-34
gb|ABG22122.1| polyprotein [Prunus avium]                             146   1e-33
gb|ABG22124.1| polyprotein [Prunus avium]                             145   3e-33
ref|NP_085537.1| hypothetical protein ArthMp070 [Arabidopsis tha...   145   4e-33

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/128 (61%), Positives = 99/128 (77%)
 Frame = +3

Query: 3    LTYVLVYVDDILITGSCPTTYKRIISQLSSLFAMKDLGSIHYFLGLEVKRQSNGLFLSQT 182
            +T++LVYVDDI+ITGS  T  + IISQL ++F +KDLG I+YFLG+EV +   GL L Q 
Sbjct: 1335 ITFILVYVDDIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQA 1394

Query: 183  KYVYDLLSKANIIHAKPCSTPISSSCKLDAHTGEYLLDPTEYRSLVGGLQYLTWTRPDIS 362
            KY  DLL K +++ AKPC+TP+S+S KLD H+G  L DPT YRS VG LQYLTWTRPD++
Sbjct: 1395 KYALDLLKKTDMLGAKPCATPVSTS-KLD-HSGTLLSDPTSYRSTVGALQYLTWTRPDLA 1452

Query: 363  FAVNLVCQ 386
            FAVN VCQ
Sbjct: 1453 FAVNQVCQ 1460


>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/128 (56%), Positives = 94/128 (73%)
 Frame = +3

Query: 3    LTYVLVYVDDILITGSCPTTYKRIISQLSSLFAMKDLGSIHYFLGLEVKRQSNGLFLSQT 182
            +TYVLVYVDDIL+TGS       +I+QL+S F++KDLG +HYFLG++V   +NGL LSQT
Sbjct: 640  ITYVLVYVDDILVTGSDTVAITSLIAQLNSEFSLKDLGKVHYFLGIQVSHTNNGLHLSQT 699

Query: 183  KYVYDLLSKANIIHAKPCSTPISSSCKLDAHTGEYLLDPTEYRSLVGGLQYLTWTRPDIS 362
            KY+ DLL K  ++H KP  TP+ +S KL A  G+ + D   YRS VG LQY+T TRP++S
Sbjct: 700  KYIRDLLQKTKMVHCKPARTPLPTSLKLRAGDGDLVEDLHGYRSTVGALQYVTITRPELS 759

Query: 363  FAVNLVCQ 386
            F+VN VCQ
Sbjct: 760  FSVNKVCQ 767


>gb|ABG22122.1| polyprotein [Prunus avium]
          Length = 263

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/122 (58%), Positives = 91/122 (74%)
 Frame = +3

Query: 21  YVDDILITGSCPTTYKRIISQLSSLFAMKDLGSIHYFLGLEVKRQSNGLFLSQTKYVYDL 200
           YVDD+ I GS P+    +ISQL   F+MK+LG +HYFLG++ +R    LFLSQ+KY  DL
Sbjct: 1   YVDDMFIVGSSPSFCNSLISQLGLQFSMKNLGPLHYFLGIQFRRTPTSLFLSQSKYTLDL 60

Query: 201 LSKANIIHAKPCSTPISSSCKLDAHTGEYLLDPTEYRSLVGGLQYLTWTRPDISFAVNLV 380
           L++A+++  KPCS+P +S  KLD  +G  L DPT YRSLVG LQY+TWTRPDI+FAVN V
Sbjct: 61  LTRASMVACKPCSSP-ASPTKLDTESGMLLPDPTLYRSLVGALQYITWTRPDIAFAVNQV 119

Query: 381 CQ 386
           CQ
Sbjct: 120 CQ 121


>gb|ABG22124.1| polyprotein [Prunus avium]
          Length = 263

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/122 (59%), Positives = 90/122 (73%)
 Frame = +3

Query: 21  YVDDILITGSCPTTYKRIISQLSSLFAMKDLGSIHYFLGLEVKRQSNGLFLSQTKYVYDL 200
           YVDD+LI GS P+    +ISQL   F+MK+LG +HYFLG++  R    LFLSQ+KY  DL
Sbjct: 1   YVDDMLIVGSSPSFCNSLISQLGLQFSMKNLGPLHYFLGIQFHRTPTSLFLSQSKYTLDL 60

Query: 201 LSKANIIHAKPCSTPISSSCKLDAHTGEYLLDPTEYRSLVGGLQYLTWTRPDISFAVNLV 380
           L++A+++  KPCS+P +S  KLD  +G  L DPT YRSLVG LQY+TWTRPDI FAVN V
Sbjct: 61  LTRASMVACKPCSSP-ASPTKLDTESGMLLPDPTLYRSLVGALQYITWTRPDIVFAVNQV 119

Query: 381 CQ 386
           CQ
Sbjct: 120 CQ 121


>ref|NP_085537.1| hypothetical protein ArthMp070 [Arabidopsis thaliana]
           gi|45477041|sp|P92519.1|M810_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00810;
           AltName: Full=ORF240b gi|1785739|emb|CAA69823.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 240

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/126 (55%), Positives = 92/126 (73%)
 Frame = +3

Query: 9   YVLVYVDDILITGSCPTTYKRIISQLSSLFAMKDLGSIHYFLGLEVKRQSNGLFLSQTKY 188
           Y+L+YVDDIL+TGS  T    +I QLSS F+MKDLG +HYFLG+++K   +GLFLSQTKY
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 189 VYDLLSKANIIHAKPCSTPISSSCKLDAHTGEYLLDPTEYRSLVGGLQYLTWTRPDISFA 368
              +L+ A ++  KP STP+         T +Y  DP+++RS+VG LQYLT TRPDIS+A
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 369 VNLVCQ 386
           VN+VCQ
Sbjct: 121 VNIVCQ 126


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