BLASTX nr result

ID: Coptis25_contig00031079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031079
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42595.1| TPA: hypothetical protein ZEAMMB73_160511 [Zea m...    58   2e-06
ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [S...    58   2e-06
ref|NP_001132900.1| uncharacterized protein LOC100194398 [Zea ma...    58   2e-06
ref|XP_003561403.1| PREDICTED: LOW QUALITY PROTEIN: valyl-tRNA s...    57   3e-06
ref|NP_568337.4| valyl-tRNA synthetase [Arabidopsis thaliana] gi...    57   3e-06

>tpg|DAA42595.1| TPA: hypothetical protein ZEAMMB73_160511 [Zea mays]
          Length = 403

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +1

Query: 1   KMQIEYDALVARLSSEKFVEKAPEKVVLXXXXXXXXXXXXITLTKSRLQLLQSTI 165
           KMQ EYDALVARL+S  FVEKAPE +V             I+LTK+RL  LQSTI
Sbjct: 347 KMQSEYDALVARLNSPSFVEKAPEDIVRGVREKASEADEKISLTKNRLTFLQSTI 401


>ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
            gi|241922754|gb|EER95898.1| hypothetical protein
            SORBIDRAFT_02g003650 [Sorghum bicolor]
          Length = 977

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +1

Query: 1    KMQIEYDALVARLSSEKFVEKAPEKVVLXXXXXXXXXXXXITLTKSRLQLLQSTI 165
            KMQ EYDALVARL+S  FVEKAPE +V             I+LTK+RL  LQSTI
Sbjct: 921  KMQSEYDALVARLNSPSFVEKAPEDIVRGVREKASEADEKISLTKNRLAFLQSTI 975


>ref|NP_001132900.1| uncharacterized protein LOC100194398 [Zea mays]
           gi|194695704|gb|ACF81936.1| unknown [Zea mays]
          Length = 199

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +1

Query: 1   KMQIEYDALVARLSSEKFVEKAPEKVVLXXXXXXXXXXXXITLTKSRLQLLQSTI 165
           KMQ EYDALVARL+S  FVEKAPE +V             I+LTK+RL  LQSTI
Sbjct: 143 KMQSEYDALVARLNSPSFVEKAPEDIVRGVREKASEADEKISLTKNRLTFLQSTI 197


>ref|XP_003561403.1| PREDICTED: LOW QUALITY PROTEIN: valyl-tRNA synthetase-like
            [Brachypodium distachyon]
          Length = 947

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +1

Query: 1    KMQIEYDALVARLSSEKFVEKAPEKVVLXXXXXXXXXXXXITLTKSRLQLLQSTI 165
            KMQ EYDAL+ARL+S  FVEKAPE +V             I+LTK+RL  LQST+
Sbjct: 891  KMQTEYDALLARLNSPSFVEKAPEDIVRGVREKASEAEEKISLTKNRLSFLQSTV 945


>ref|NP_568337.4| valyl-tRNA synthetase [Arabidopsis thaliana]
            gi|332004946|gb|AED92329.1| valyl-tRNA synthetase
            [Arabidopsis thaliana]
          Length = 974

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = +1

Query: 1    KMQIEYDALVARLSSEKFVEKAPEKVVLXXXXXXXXXXXXITLTKSRLQLLQST 162
            KMQ EYDAL+ RLSS KFVEKAPE+VV             I LTK+RL  L+ST
Sbjct: 915  KMQTEYDALITRLSSPKFVEKAPEEVVRGVKEQVEELEEKIKLTKARLDFLKST 968


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