BLASTX nr result

ID: Coptis25_contig00031077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031077
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_003529003.1| PREDICTED: glutamyl-tRNA synthetase, chlorop...    91   8e-17
gb|ACU19039.1| unknown [Glycine max]                                   91   8e-17
ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chlorop...    90   2e-16
emb|CAN72214.1| hypothetical protein VITISV_039082 [Vitis vinifera]    90   2e-16

>ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|222849979|gb|EEE87526.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = -3

Query: 210 LLGRSKRGKFILQIEDTYLDRSTKESKNVVLQHLSWLGLDWDWDEGPGIGGDYGPYRQFG 31
           L  RSK GKF+L+IEDT L+RSTKES+  VL+ LSWLGL  DWDEGPG+GGDYGPYRQ  
Sbjct: 84  LFARSKGGKFVLRIEDTDLERSTKESEEAVLRDLSWLGL--DWDEGPGVGGDYGPYRQSE 141

Query: 30  LNS 22
            NS
Sbjct: 142 RNS 144


>ref|XP_003529003.1| PREDICTED: glutamyl-tRNA synthetase,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 562

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = -3

Query: 210 LLGRSKRGKFILQIEDTYLDRSTKESKNVVLQHLSWLGLDWDWDEGPGIGGDYGPYRQFG 31
           L  RSK GKF+L+IEDT L+RST+ES+  +L+ LSWLGL  DWDEGPG+GGDYGPYRQ  
Sbjct: 75  LFARSKGGKFVLRIEDTDLERSTRESEEAMLKDLSWLGL--DWDEGPGVGGDYGPYRQSD 132

Query: 30  LNS 22
            NS
Sbjct: 133 RNS 135


>gb|ACU19039.1| unknown [Glycine max]
          Length = 265

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = -3

Query: 210 LLGRSKRGKFILQIEDTYLDRSTKESKNVVLQHLSWLGLDWDWDEGPGIGGDYGPYRQFG 31
           L  RSK GKF+L+IEDT L+RST+ES+  +L+ LSWLGL  DWDEGPG+GGDYGPYRQ  
Sbjct: 75  LFARSKGGKFVLRIEDTDLERSTRESEEAMLKDLSWLGL--DWDEGPGVGGDYGPYRQSD 132

Query: 30  LNS 22
            NS
Sbjct: 133 RNS 135


>ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial
           [Vitis vinifera] gi|297744457|emb|CBI37719.3| unnamed
           protein product [Vitis vinifera]
          Length = 566

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -3

Query: 210 LLGRSKRGKFILQIEDTYLDRSTKESKNVVLQHLSWLGLDWDWDEGPGIGGDYGPYRQFG 31
           L  RSK GKF+L+IEDT L+RSTK+S+  +LQ LSWLGL   WDEGPG+GGDYGPYRQ  
Sbjct: 76  LFARSKGGKFVLRIEDTDLERSTKQSEEALLQDLSWLGL--HWDEGPGVGGDYGPYRQSE 133

Query: 30  LNS 22
            NS
Sbjct: 134 RNS 136


>emb|CAN72214.1| hypothetical protein VITISV_039082 [Vitis vinifera]
          Length = 555

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -3

Query: 210 LLGRSKRGKFILQIEDTYLDRSTKESKNVVLQHLSWLGLDWDWDEGPGIGGDYGPYRQFG 31
           L  RSK GKF+L+IEDT L+RSTK+S+  +LQ LSWLGL   WDEGPG+GGDYGPYRQ  
Sbjct: 76  LFARSKGGKFVLRIEDTDLERSTKQSEEALLQDLSWLGL--HWDEGPGVGGDYGPYRQSE 133

Query: 30  LNS 22
            NS
Sbjct: 134 RNS 136


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