BLASTX nr result

ID: Coptis25_contig00031057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031057
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ91133.1| ampk protein [Platanus x acerifolia]                   60   1e-07

>emb|CAJ91133.1| ampk protein [Platanus x acerifolia]
          Length = 205

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = -1

Query: 292 MAGVMRCLEKKC-SWFLPKNAHENIHGNIHRRRFKVGLCNTRRDSQKITLLRHVSNGKYP 116
           M GV RC   K  SWF   ++ +    NI R    V LCN R  S+++T L H S GK P
Sbjct: 5   MTGVARCCSAKHDSWFF-WHSRKLGQENIQRPSCNVALCNLRMGSRRLTFLHHASIGKSP 63

Query: 115 RSQSSWRTFALPISLE 68
              SSWR F++P+S+E
Sbjct: 64  MQHSSWRIFSMPVSVE 79


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