BLASTX nr result

ID: Coptis25_contig00031048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031048
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510749.1| conserved hypothetical protein [Ricinus comm...   334   1e-89
ref|XP_002273918.1| PREDICTED: uncharacterized protein LOC100247...   326   3e-87
ref|XP_002307008.1| predicted protein [Populus trichocarpa] gi|2...   322   4e-86
ref|NP_565768.1| uncharacterized protein [Arabidopsis thaliana] ...   311   1e-82
ref|XP_002879458.1| hypothetical protein ARALYDRAFT_902431 [Arab...   310   2e-82

>ref|XP_002510749.1| conserved hypothetical protein [Ricinus communis]
           gi|223551450|gb|EEF52936.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  334 bits (857), Expect = 1e-89
 Identities = 158/235 (67%), Positives = 184/235 (78%), Gaps = 11/235 (4%)
 Frame = -3

Query: 673 KLTSCFETKPLFATLLAITLVMLIWNIQPYYDNLLSTTRPCTATPPN-----------PV 527
           KL SC ETKPL ATLLA+TLVML+WN+ PYY NLLSTTRPC+A               P+
Sbjct: 15  KLPSCLETKPLVATLLALTLVMLLWNLPPYYQNLLSTTRPCSAPAAAAALAASNASSLPI 74

Query: 526 PHSTAQKFSTPKPKAQKLADQNKRTFTSYGNAASLFVQMGAYRGGPNTFAIVGLASKPIH 347
              + QK+ST       ++D NKR F +YGNAA+LFV+MGAYRGGP TFA+VGLASKPIH
Sbjct: 75  TSVSEQKYSTG------VSDPNKRIFEAYGNAAALFVKMGAYRGGPRTFAVVGLASKPIH 128

Query: 346 VYGHPWYKCEWISNNNRSIKTKAYKILPDWGYGRVYTVVVVNCTFPTNPNEDNTGGTLVL 167
           V+G PWYKCEWISNN  S++ KAYK+LPDWGYGRVYTVVVVNCTFP NPN +N GG L+L
Sbjct: 129 VFGRPWYKCEWISNNGSSMRAKAYKMLPDWGYGRVYTVVVVNCTFPLNPNRENAGGKLIL 188

Query: 166 YAYYNQSPKRYERIVALQEEPGVYNASTYSPPYKYEYLYCGSSLYGNLSAVRIRE 2
            AYY +SP++YE+IVAL+E PG YN S Y PPY+YEYLYCGSSLYGNLSA R+RE
Sbjct: 189 NAYYGESPRKYEKIVALEEAPGSYNDSNYHPPYQYEYLYCGSSLYGNLSAARMRE 243


>ref|XP_002273918.1| PREDICTED: uncharacterized protein LOC100247851 [Vitis vinifera]
          Length = 504

 Score =  326 bits (836), Expect = 3e-87
 Identities = 157/244 (64%), Positives = 182/244 (74%), Gaps = 20/244 (8%)
 Frame = -3

Query: 673 KLTSCFETKPLFATLLAITLVMLIWNIQPYYDNLLSTTRPCTAT---------------- 542
           KL  CFETKPL ATLLA+TLVM+IWN+QPYY+NL+STT  C+AT                
Sbjct: 17  KLFLCFETKPLVATLLALTLVMVIWNLQPYYENLISTTSRCSATAAAATATSTTIATGNA 76

Query: 541 ---PPNPVPHSTAQKFSTPKPKAQKLADQNKRTFTSYGNAASLFVQMGAYRGGPNTFAIV 371
              P  P   S+  +     PKA   AD NKR F +YGNAASLFV MGAYRGGP TFA+V
Sbjct: 77  SILPYTPPSSSSVSEKKVSTPKASSNADPNKRLFYAYGNAASLFVLMGAYRGGPRTFAVV 136

Query: 370 GLASKPIHVYGHPWYKCEWISNN-NRSIKTKAYKILPDWGYGRVYTVVVVNCTFPTNPNE 194
           GLASKP+HVYG PWYKCEWIS+N + S++ KAYK+LPDWGYGRVYTVVVVNCTF  NPNE
Sbjct: 137 GLASKPLHVYGRPWYKCEWISSNGSASLRAKAYKMLPDWGYGRVYTVVVVNCTFAENPNE 196

Query: 193 DNTGGTLVLYAYYNQSPKRYERIVALQEEPGVYNASTYSPPYKYEYLYCGSSLYGNLSAV 14
           DN GG LVL AYY +SP+++E+   L+E+PG YN S Y PPY+YEYLYCGSSLYG+LSA 
Sbjct: 197 DNAGGKLVLRAYYGESPRKFEKFTVLEEQPGSYNESNYRPPYQYEYLYCGSSLYGSLSAA 256

Query: 13  RIRE 2
           RIRE
Sbjct: 257 RIRE 260


>ref|XP_002307008.1| predicted protein [Populus trichocarpa] gi|222856457|gb|EEE94004.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  322 bits (826), Expect = 4e-86
 Identities = 155/236 (65%), Positives = 180/236 (76%), Gaps = 12/236 (5%)
 Frame = -3

Query: 673 KLTSCFETKPLFATLLAITLVMLIWNIQPYYDNLLSTT-RPCTATPPNPVPHSTA----- 512
           KL +CFETKPL ATLLA+TLVML+WN+ PYY NLLSTT RP  + P   V  S       
Sbjct: 16  KLPACFETKPLVATLLALTLVMLLWNLPPYYQNLLSTTTRPSCSAPETTVSISNTSSSFT 75

Query: 511 ------QKFSTPKPKAQKLADQNKRTFTSYGNAASLFVQMGAYRGGPNTFAIVGLASKPI 350
                 QK+ +    +   AD NKR F +YGNAA+LFVQMGAYRGGP TFA+VGLASKPI
Sbjct: 76  STSLSDQKYLSSSSSSSSNADPNKRIFQAYGNAAALFVQMGAYRGGPTTFAVVGLASKPI 135

Query: 349 HVYGHPWYKCEWISNNNRSIKTKAYKILPDWGYGRVYTVVVVNCTFPTNPNEDNTGGTLV 170
           HV+  PWYKCEWISNN  SI+ KAYK+LPDWGYGRVYTVVVVNCTFP NPN+DN GG L+
Sbjct: 136 HVFRLPWYKCEWISNNGSSIRAKAYKMLPDWGYGRVYTVVVVNCTFPVNPNQDNAGGRLM 195

Query: 169 LYAYYNQSPKRYERIVALQEEPGVYNASTYSPPYKYEYLYCGSSLYGNLSAVRIRE 2
           L AYY++S ++YE+ +AL+E PG YN S + PPY+YEYLYCGSSLYGNLSA R RE
Sbjct: 196 LNAYYDESQRKYEKFMALEELPGSYNESKFRPPYQYEYLYCGSSLYGNLSASRFRE 251


>ref|NP_565768.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20196847|gb|AAB80674.2| expressed protein
           [Arabidopsis thaliana] gi|21537058|gb|AAM61399.1|
           unknown [Arabidopsis thaliana]
           gi|22655220|gb|AAM98200.1| expressed protein
           [Arabidopsis thaliana] gi|31711902|gb|AAP68307.1|
           At2g33570 [Arabidopsis thaliana]
           gi|330253760|gb|AEC08854.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 496

 Score =  311 bits (796), Expect = 1e-82
 Identities = 146/238 (61%), Positives = 175/238 (73%), Gaps = 16/238 (6%)
 Frame = -3

Query: 667 TSCFETKPLFATLLAITLVMLIWNIQPYYDNLLSTTRPCTATPPNPVP-------HSTAQ 509
           T CFE KP+ ATLLA++LVM++WN+ PYY NL+ST RPC+A               ++A+
Sbjct: 14  TVCFEKKPIIATLLALSLVMIVWNLPPYYHNLISTARPCSAVTTTTTTTLLSSSNFTSAE 73

Query: 508 KFSTPKPKAQKLADQ---------NKRTFTSYGNAASLFVQMGAYRGGPNTFAIVGLASK 356
            F+T        A Q         NKR F  +GNAA+LFV MGAYRGGP TF+++GLASK
Sbjct: 74  NFTTSLSTTTAAASQKYDSTPSDPNKRVFQPFGNAAALFVLMGAYRGGPTTFSVIGLASK 133

Query: 355 PIHVYGHPWYKCEWISNNNRSIKTKAYKILPDWGYGRVYTVVVVNCTFPTNPNEDNTGGT 176
           PIHVYG PWYKCEWISNN  SI+ KA KILPDWGYGRVYTVVVVNCTF +NPN DNTGG 
Sbjct: 134 PIHVYGKPWYKCEWISNNGTSIRAKAQKILPDWGYGRVYTVVVVNCTFNSNPNSDNTGGK 193

Query: 175 LVLYAYYNQSPKRYERIVALQEEPGVYNASTYSPPYKYEYLYCGSSLYGNLSAVRIRE 2
           L+L AYYN+SPK +ER   L+E  G+Y+ S YSPPY+Y+YLYCGSSLYGN+SA R+RE
Sbjct: 194 LILNAYYNESPKLFERFTTLEESAGIYDESKYSPPYQYDYLYCGSSLYGNVSASRMRE 251


>ref|XP_002879458.1| hypothetical protein ARALYDRAFT_902431 [Arabidopsis lyrata subsp.
           lyrata] gi|297325297|gb|EFH55717.1| hypothetical protein
           ARALYDRAFT_902431 [Arabidopsis lyrata subsp. lyrata]
          Length = 495

 Score =  310 bits (794), Expect = 2e-82
 Identities = 146/237 (61%), Positives = 177/237 (74%), Gaps = 15/237 (6%)
 Frame = -3

Query: 667 TSCFETKPLFATLLAITLVMLIWNIQPYYDNLLSTTRPCTATPPNPVPHSTAQKFS---- 500
           T CFE KPL ATLLA++LVM+IWN+ PYY NL+ST RPC+A         ++  F+    
Sbjct: 14  TVCFEKKPLIATLLALSLVMIIWNLPPYYHNLISTARPCSAVTTTTTTILSSSNFTAAAN 73

Query: 499 -------TPKPKAQKL----ADQNKRTFTSYGNAASLFVQMGAYRGGPNTFAIVGLASKP 353
                  T    +QK     +D NKR F ++GNAA+LFV MGAYRGGP TF+++GLASKP
Sbjct: 74  FTTSLSTTTAAASQKYDSTPSDPNKRVFQAFGNAAALFVLMGAYRGGPATFSVIGLASKP 133

Query: 352 IHVYGHPWYKCEWISNNNRSIKTKAYKILPDWGYGRVYTVVVVNCTFPTNPNEDNTGGTL 173
           IHV+G PWYKCEWISNN  SI+ KA KILPDWGYGRVYTVVVVNCTF +NPN DNTGG L
Sbjct: 134 IHVFGKPWYKCEWISNNGTSIRAKAQKILPDWGYGRVYTVVVVNCTFNSNPNSDNTGGKL 193

Query: 172 VLYAYYNQSPKRYERIVALQEEPGVYNASTYSPPYKYEYLYCGSSLYGNLSAVRIRE 2
           +L AYYN+SPK +ER   L+E  G+Y+ S YSPPY+Y+YLYCGSSLYGN+S+ R+RE
Sbjct: 194 ILNAYYNESPKLFERFTTLEESAGIYDESKYSPPYQYDYLYCGSSLYGNVSSSRMRE 250


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