BLASTX nr result

ID: Coptis25_contig00031016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031016
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864814.1| leucine-rich repeat family protein [Arabidop...    55   8e-06

>ref|XP_002864814.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310649|gb|EFH41073.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = -3

Query: 139 MGTWVFVFSV----TLFITCSLALSPDGEALLEMKKTLNDSRSSLRSW 8
           MG  ++VFSV    TLF++CS AL+PDG ALLE+K   ND+R+SL +W
Sbjct: 1   MGISIWVFSVISAATLFVSCSSALTPDGFALLELKSGFNDTRNSLENW 48


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