BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031015
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    90   2e-21
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   4e-20
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    87   8e-20
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    88   9e-20
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    86   1e-19

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 89.7 bits (221), Expect(2) = 2e-21
 Identities = 40/81 (49%), Positives = 59/81 (72%)
 Frame = +3

Query: 84  KRWRDLLSQCLTAISFQVLLNGSPMEKIKPERGLRQGDPLSLYLFILITEALSRMIARAE 263
           ++W  L+ +C+T +++++ +N S  +KI P+RGLRQGDPLS YLFI+  E LS M+ +AE
Sbjct: 181 EKWVQLIMKCVTTVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAE 240

Query: 264 NQGSIHGIKIRRNSPLIAHLF 326
            +G I GIKI R +P + HLF
Sbjct: 241 QKGKIEGIKICRGAPKVNHLF 261



 Score = 37.7 bits (86), Expect(2) = 2e-21
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = +2

Query: 11  ALKMDMAKAYDRVEWTFLDGI 73
           A+K+DM+KAYDRVEW+FL+ +
Sbjct: 153 AIKLDMSKAYDRVEWSFLENM 173


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 90.1 bits (222), Expect(2) = 4e-20
 Identities = 39/79 (49%), Positives = 57/79 (72%)
 Frame = +3

Query: 90  WRDLLSQCLTAISFQVLLNGSPMEKIKPERGLRQGDPLSLYLFILITEALSRMIARAENQ 269
           +R  + QC+T +S+ +++NG P  + KP  GLRQGDPLS YLFILI + LSR++    + 
Sbjct: 615 YRQWIMQCVTTVSYSIIVNGEPTTRFKPSCGLRQGDPLSSYLFILIMDVLSRLLIDGVSA 674

Query: 270 GSIHGIKIRRNSPLIAHLF 326
           GS  GIK+ R+SP+++HLF
Sbjct: 675 GSFQGIKLSRSSPVLSHLF 693



 Score = 32.7 bits (73), Expect(2) = 4e-20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +2

Query: 11  ALKMDMAKAYDRVEWTFL 64
           ALK+DM KAYD+V+W FL
Sbjct: 585 ALKIDMFKAYDKVDWDFL 602


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 86.7 bits (213), Expect(2) = 8e-20
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = +3

Query: 87   RWRDLLSQCLTAISFQVLLNGSPMEKIKPERGLRQGDPLSLYLFILITEALSRMIARAEN 266
            RW   +  C+T++S++VL+NGSP  KI P RG+RQGDPLS YLF+   E LS M+ +AE 
Sbjct: 963  RWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEV 1022

Query: 267  QGSIHGIKIRRNSPLIAHL 323
               IHG+KI ++   I+HL
Sbjct: 1023 NKQIHGMKITKDCLAISHL 1041



 Score = 35.0 bits (79), Expect(2) = 8e-20
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +2

Query: 5    FYALKMDMAKAYDRVEWTFLDGI 73
            + A+K D++KAYDRVEW FL+ +
Sbjct: 932  YVAVKTDISKAYDRVEWNFLEKV 954


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 88.2 bits (217), Expect(2) = 9e-20
 Identities = 41/80 (51%), Positives = 56/80 (70%)
 Frame = +3

Query: 87  RWRDLLSQCLTAISFQVLLNGSPMEKIKPERGLRQGDPLSLYLFILITEALSRMIARAEN 266
           +W  L+ +C+T +S+++ +NG   ++I P+RG RQGDPLS YLFIL  E LS M+  AEN
Sbjct: 25  KWIHLIMKCVTTVSYRINVNGEYTDQIVPKRGSRQGDPLSPYLFILCAEGLSAMLQSAEN 84

Query: 267 QGSIHGIKIRRNSPLIAHLF 326
            G I GIKI R +P + HLF
Sbjct: 85  AGKIEGIKICRGAPRVNHLF 104



 Score = 33.5 bits (75), Expect(2) = 9e-20
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 26 MAKAYDRVEWTFLDGI 73
          M+KAYDRVEWTFL G+
Sbjct: 1  MSKAYDRVEWTFLQGM 16


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 85.5 bits (210), Expect(2) = 1e-19
 Identities = 38/78 (48%), Positives = 56/78 (71%)
 Frame = +3

Query: 90  WRDLLSQCLTAISFQVLLNGSPMEKIKPERGLRQGDPLSLYLFILITEALSRMIARAENQ 269
           W  L+ +C+ ++ +QVL+NG+P  +I P RGLRQGDPLS YLF++ TE L +M+  AE +
Sbjct: 602 WIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQK 661

Query: 270 GSIHGIKIRRNSPLIAHL 323
             I G+K+ R +P I+HL
Sbjct: 662 NQITGLKVARGAPPISHL 679



 Score = 35.8 bits (81), Expect(2) = 1e-19
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 5   FYALKMDMAKAYDRVEWTFLD 67
           F A+K D++KAYDRVEW FL+
Sbjct: 570 FIAIKTDISKAYDRVEWPFLE 590