BLASTX nr result
ID: Coptis25_contig00031010
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031010 (608 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera] 239 4e-61 ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 147 1e-33 ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32 gb|ABR16216.1| unknown [Picea sitchensis] 142 5e-32 ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ... 141 8e-32 >emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera] Length = 799 Score = 239 bits (609), Expect = 4e-61 Identities = 115/200 (57%), Positives = 147/200 (73%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGG 429 KVF+ M RNLFSWT +IGA S + D K Y KM+ SG+KAD FLYPLV K+CG Sbjct: 110 KVFEGMDERNLFSWTVMIGACSKNG--DAEKAIELYGKMISSGVKADCFLYPLVLKSCGA 167 Query: 428 MKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTM 249 +K LRRG+ VHG+V+ +G D+V+MNS+IDMY KCE + D+ERVF+E+ VRD+ TWTTM Sbjct: 168 VKDLRRGQCVHGEVLITGLLGDVVVMNSLIDMYMKCEMVGDSERVFDEMDVRDVITWTTM 227 Query: 248 LTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGC 69 + GY+QMG G + LE K M+ S VRP SAT G++P+FSD+G ++AKQIHGLA V G Sbjct: 228 IVGYMQMGRGLEGLELLKEMLSSQVRPSSATLAGVLPLFSDLGYLKLAKQIHGLAAVTGF 287 Query: 68 NCDKFFGTVLIDMYANCGGL 9 +K GT L+D+YANCGGL Sbjct: 288 EYEKHVGTALVDVYANCGGL 307 Score = 82.4 bits (202), Expect = 6e-14 Identities = 43/160 (26%), Positives = 79/160 (49%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGG 429 +VFDEM VR++ +WT +I Y ++G ++M+ S ++ + V Sbjct: 211 RVFDEMDVRDVITWTTMIVGYMQMGRG--LEGLELLKEMLSSQVRPSSATLAGVLPLFSD 268 Query: 428 MKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTM 249 + L+ +++HG +GFE++ + +++D+YA C L VF+ V +D+ W TM Sbjct: 269 LGYLKLAKQIHGLAAVTGFEYEKHVGTALVDVYANCGGLYFGRLVFDRVKEKDVSCWNTM 328 Query: 248 LTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFS 129 + YVQ +A+ K M + P +T+ P +S Sbjct: 329 IKSYVQANLSDEAISLLKFMHLDGIHPVKSTWYCFFPHYS 368 Score = 73.9 bits (180), Expect = 2e-11 Identities = 40/151 (26%), Positives = 74/151 (49%) Frame = -1 Query: 458 YPLVFKACGGMKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVC 279 Y + ++C K +GR +H ++ +GFE LVL+N+++ MY+K + +VF + Sbjct: 57 YLSLIRSCIKFKAFSQGREIHKHMVNAGFEPSLVLLNNIMIMYSKFGDFGETFKVFEGMD 116 Query: 278 VRDIFTWTTMLTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQ 99 R++F+WT M+ + G A+E + M+ S V+ + ++ + + Sbjct: 117 ERNLFSWTVMIGACSKNGDAEKAIELYGKMISSGVKADCFLYPLVLKSCGAVKDLRRGQC 176 Query: 98 IHGLAIVNGCNCDKFFGTVLIDMYANCGGLG 6 +HG ++ G D LIDMY C +G Sbjct: 177 VHGEVLITGLLGDVVVMNSLIDMYMKCEMVG 207 >ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula] gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 620 Score = 147 bits (371), Expect = 1e-33 Identities = 75/199 (37%), Positives = 111/199 (55%) Frame = -1 Query: 605 VFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGGM 426 +FD++ +NLF W +I Y+ + D Y KM+ G++ DNF P V KAC + Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHD--NAIILYHKMLDYGLRPDNFTLPFVLKACSAL 161 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTML 246 + GR +H VI SG+E DL + ++IDMYAKC + DA RVF+++ VRD W +ML Sbjct: 162 SAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSML 221 Query: 245 TGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGCN 66 Y Q G+ +++ + M + VRP AT V +I +D+ C ++IHG +G Sbjct: 222 AAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQ 281 Query: 65 CDKFFGTVLIDMYANCGGL 9 + T LIDMYA CG + Sbjct: 282 SNDKVKTALIDMYAKCGSV 300 Score = 87.4 bits (215), Expect = 2e-15 Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 1/201 (0%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGG 429 +VFD++ VR+ W +++ AY+ + D + R+M +G++ V + Sbjct: 204 RVFDKIVVRDAVLWNSMLAAYAQNGHPD--ESISLCREMAANGVRPTEATLVTVISSSAD 261 Query: 428 MKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTM 249 + L GR +HG GF+ + + ++IDMYAKC S++ A +F + + + +W + Sbjct: 262 VACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAI 321 Query: 248 LTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVN-G 72 +TGY G AL+ F M D RP TFVG++ S + + ++ L + + G Sbjct: 322 ITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYG 380 Query: 71 CNCDKFFGTVLIDMYANCGGL 9 T +ID+ +CG L Sbjct: 381 ITPTVQHYTCMIDLLGHCGQL 401 Score = 77.4 bits (189), Expect = 2e-12 Identities = 40/148 (27%), Positives = 72/148 (48%) Frame = -1 Query: 458 YPLVFKACGGMKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVC 279 Y + ++C K L G+++H G ++ L ++ +YA SL +A +F+++ Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109 Query: 278 VRDIFTWTTMLTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQ 99 +++F W ++ GY G +A+ + M+ +RP + T ++ S + + Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169 Query: 98 IHGLAIVNGCNCDKFFGTVLIDMYANCG 15 IH I +G D F G LIDMYA CG Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCG 197 >ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Vitis vinifera] gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera] Length = 802 Score = 142 bits (359), Expect = 4e-32 Identities = 75/201 (37%), Positives = 111/201 (55%) Frame = -1 Query: 605 VFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGGM 426 +F+ M + F W +I + ++ + FY +M G++ DNF YP V KACGG+ Sbjct: 82 LFENMRQCDTFIWNVMIRGFVDNGL--FWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGL 139 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTML 246 L G RVHG VI SG + D+ + NS+I MYAK +E AE VF E+ VRD+ +W +M+ Sbjct: 140 YDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMI 199 Query: 245 TGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGCN 66 +GYV +G G +L F+ M S ++ + +GI+ S G K+IH + + Sbjct: 200 SGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLE 259 Query: 65 CDKFFGTVLIDMYANCGGLGY 3 D T L+DMYA CG + Y Sbjct: 260 LDVMVQTSLVDMYAKCGRMDY 280 Score = 114 bits (286), Expect = 1e-23 Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 1/200 (0%) Frame = -1 Query: 605 VFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGGM 426 VF EM VR+L SW ++I Y + D + +R+M SGIK D F + AC Sbjct: 183 VFREMPVRDLVSWNSMISGYVSVG--DGWRSLSCFREMQASGIKLDRFSVIGILGACSLE 240 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTML 246 LR G+ +H ++ S E D+++ S++DMYAKC ++ AER+F+++ + I W M+ Sbjct: 241 GFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMI 300 Query: 245 TGYVQMGYGRDALEFFKVMM-CSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGC 69 GY ++ + + M + P T + ++P + + + K +HG AI NG Sbjct: 301 GGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGF 360 Query: 68 NCDKFFGTVLIDMYANCGGL 9 T L+DMY CG L Sbjct: 361 LPHLVLETALVDMYGECGKL 380 Score = 110 bits (276), Expect = 1e-22 Identities = 56/201 (27%), Positives = 110/201 (54%), Gaps = 1/201 (0%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPL-VFKACG 432 ++FD+++ +++ +W A+IG YS N++ + + F + RKM G +++ + + C Sbjct: 283 RLFDQITDKSIVAWNAMIGGYS-LNAQSF-ESFAYVRKMQEGGKLHPDWITMINLLPPCA 340 Query: 431 GMKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTT 252 ++ + G+ VHG I +GF LVL +++DMY +C L+ AE +F ++ R++ +W Sbjct: 341 QLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNA 400 Query: 251 MLTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNG 72 M+ Y + G R A+ F+ + ++P + T I+P ++++ A+QIHG Sbjct: 401 MIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLK 460 Query: 71 CNCDKFFGTVLIDMYANCGGL 9 + + F ++ MY CG L Sbjct: 461 LDSNTFVSNSIVFMYGKCGNL 481 Score = 85.1 bits (209), Expect = 9e-15 Identities = 42/155 (27%), Positives = 77/155 (49%) Frame = -1 Query: 605 VFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGGM 426 +F +M+ RNL SW A+I +Y+ + K ++ + +K D + A + Sbjct: 386 LFGQMNERNLISWNAMIASYTKNGENR--KAMTLFQDLCNKTLKPDATTIASILPAYAEL 443 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTML 246 LR ++HG V + + + NS++ MY KC +L A +F+ + +D+ +W T++ Sbjct: 444 ASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVI 503 Query: 245 TGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGII 141 Y G+GR ++E F M P +TFV ++ Sbjct: 504 MAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLL 538 Score = 55.1 bits (131), Expect = 1e-05 Identities = 39/152 (25%), Positives = 67/152 (44%) Frame = -1 Query: 470 DNFLYPLVFKACGGMKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVF 291 D L P +FK R +R ++ E + V + + Y + +++A +F Sbjct: 35 DLILKPRIFKTA-------RSKRNQSFLV----ERNSVSLTRALSSYVERGYMKNALDLF 83 Query: 290 NEVCVRDIFTWTTMLTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFE 111 + D F W M+ G+V G DA++F+ M VR + T+ +I + Sbjct: 84 ENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLA 143 Query: 110 MAKQIHGLAIVNGCNCDKFFGTVLIDMYANCG 15 +++HG I +G + D + G LI MYA G Sbjct: 144 EGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175 >gb|ABR16216.1| unknown [Picea sitchensis] Length = 394 Score = 142 bits (358), Expect = 5e-32 Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 1/200 (0%) Frame = -1 Query: 602 FDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMV-LSGIKADNFLYPLVFKACGGM 426 FD M+ ++F W +IG Y + Y +M +S DN+ Y V AC + Sbjct: 69 FDNMTKGDVFPWNVMIGGYVKHGETR--EALELYHQMQKVSSTNPDNYTYSSVLNACARL 126 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTML 246 L G+ ++ ++I G E D+++ N++I+M+ KC S+EDA RVF+++C R++ +WT M+ Sbjct: 127 ASLSEGKLIYDEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMV 186 Query: 245 TGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGCN 66 +GY Q G+ +AL F M DV+ T ++P + + + K+IHG I G + Sbjct: 187 SGYAQGGFADEALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLD 246 Query: 65 CDKFFGTVLIDMYANCGGLG 6 G LIDMYA CG +G Sbjct: 247 LGIVVGNALIDMYAKCGSIG 266 Score = 123 bits (308), Expect = 3e-26 Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 35/228 (15%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGG 429 +VFD+M RNL SWTA++ Y+ D + R + +M +KA+ V AC Sbjct: 169 RVFDKMCERNLVSWTAMVSGYAQGGFAD--EALRMFYEMQGEDVKANYVTVASVLPACAQ 226 Query: 428 MKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVR-------- 273 + L++G+ +HG +I G + +V+ N++IDMYAKC S+ A++VF+++ R Sbjct: 227 LSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRDVVSWNVA 286 Query: 272 ---------------------------DIFTWTTMLTGYVQMGYGRDALEFFKVMMCSDV 174 D+ TW T++T Y Q GYG LE F+ M V Sbjct: 287 IAGYAQNGRFDECMELFRKMQCAGLKIDVITWNTLITAYAQNGYGDQTLELFQQMQLRGV 346 Query: 173 RPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVNGCNCDKFFGTVLIDM 30 +P S T ++ + + + K+IH L + C D G LIDM Sbjct: 347 KPNSITIASVLSACAAVSALQEGKRIHDLVNRSECKSDICVGNALIDM 394 Score = 79.0 bits (193), Expect = 6e-13 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 1/149 (0%) Frame = -1 Query: 452 LVFKACGGMKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVR 273 L+ C K L ++VH ++ +G + ++++Y KC SL DA F+ + Sbjct: 16 LLLHLCTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLNLYVKCGSLPDARLAFDNMTKG 75 Query: 272 DIFTWTTMLTGYVQMGYGRDALEFFKVMM-CSDVRPQSATFVGIIPVFSDIGCFEMAKQI 96 D+F W M+ GYV+ G R+ALE + M S P + T+ ++ + + K I Sbjct: 76 DVFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLI 135 Query: 95 HGLAIVNGCNCDKFFGTVLIDMYANCGGL 9 + I GC D LI+M+ CG + Sbjct: 136 YDEIISKGCEMDVIVENALINMFMKCGSI 164 >ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 510 Score = 141 bits (356), Expect = 8e-32 Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 2/200 (1%) Frame = -1 Query: 608 KVFDEMSVRNLFSWTAVIGAYSNSNSEDYVKGFRFYRKMVLSGIKADNFLYPLVFKACGG 429 KVFD++S R++F W VI Y+N + + Y M LSG + + YP V KACG Sbjct: 75 KVFDDLSERDVFCWNNVIKGYANMGP--FAEALHVYNAMRLSGAAPNRYTYPFVLKACGA 132 Query: 428 MKGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKCESLEDAERVFNEVCVRDIFTWTTM 249 + +GR +HG+V+ G E+DL + N+ + YAKC+ +E + +VF+E+ RDI +W +M Sbjct: 133 ERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSM 192 Query: 248 LTGYVQMGYGRDALEFFKVMMCSD--VRPQSATFVGIIPVFSDIGCFEMAKQIHGLAIVN 75 ++GY+ GY +A+ F M+ D P +AT V ++P F++ IH + Sbjct: 193 MSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKT 252 Query: 74 GCNCDKFFGTVLIDMYANCG 15 G D G LI +Y+NCG Sbjct: 253 GMKLDPAVGCGLITLYSNCG 272 Score = 67.8 bits (164), Expect = 1e-09 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 3/139 (2%) Frame = -1 Query: 425 KGLRRGRRVHGDVICSGFEWDLVLMNSVIDMYAKC--ESLEDAERVFNEVCVRDIFTWTT 252 K + R ++ H +I G + D + +ID Y++ ++E A +VF+++ RD+F W Sbjct: 31 KTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNN 90 Query: 251 MLTGYVQMGYGRDALEFFKVMMCSDVRPQSATFVGIIPVF-SDIGCFEMAKQIHGLAIVN 75 ++ GY MG +AL + M S P T+ ++ ++ C + + IHG + Sbjct: 91 VIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLK-GRIIHGNVVKC 149 Query: 74 GCNCDKFFGTVLIDMYANC 18 G D F G + YA C Sbjct: 150 GLEFDLFVGNAFVAFYAKC 168