BLASTX nr result

ID: Coptis25_contig00030995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030995
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265...   119   3e-25
emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]   117   7e-25
ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263...   112   2e-23
emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]   112   4e-23
ref|XP_003548491.1| PREDICTED: uncharacterized protein LOC100794...   111   5e-23

>ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera]
           gi|297742310|emb|CBI34459.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = +2

Query: 119 IWSFRKHNHLFVKFTLSIFVMCLAFRLFSSRSIEVPPPITQIPTVDNK--DDGVEQDNEL 292
           +WS  KHNHL VK  +SI +M LAFRL    S     P  + P + N    + V +  + 
Sbjct: 11  LWSLHKHNHLLVKVAVSILLMGLAFRLLFVHSTVPETPFVEKPVIPNPPVSEDVPEIRDP 70

Query: 293 LPQIVVETPQGKCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLY 457
           +P+ VV     KCD+F G WI NPSGP+YTNESC +I+ HQNCM NGRPDS YLY
Sbjct: 71  IPEKVVAE---KCDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPDSAYLY 122


>emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]
          Length = 420

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
 Frame = +2

Query: 119 IWSFRKHNHLFVKFTLSIFVMCLAFRLFSSRSIEVPPPITQIPTVDNKDDGVEQDNELLP 298
           +WS  KHNHL VK  +SI +M LAFRL    S     P  + P + N    V +D   +P
Sbjct: 7   LWSLHKHNHLLVKVAVSILLMGLAFRLLFVHSTVPETPFVEKPVIPNPP--VSED---VP 61

Query: 299 QIVVETPQG-KCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLY 457
           +I    P+  KCD+F G WI NPSGP+YTNESC +I+ HQNCM NGRPDS YLY
Sbjct: 62  EIRDPIPEKEKCDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPDSAYLY 115


>ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera]
          Length = 450

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 21/145 (14%)
 Frame = +2

Query: 86  MGKELKFEVNPIWSFRKHNHLFVKFTLSIFVMCLAFRLFSSRSIEVPPPITQIPTV---- 253
           M +E++FE+NP +S  +HNH FVK  L   +M LA RL+ S SI     +  + T     
Sbjct: 1   MVQEMRFEMNP-FSLHQHNHTFVKCALCFVLMGLAVRLWFSDSIRFSSAVDSVETPPEGK 59

Query: 254 -------DNKDDGVEQDNELLPQIVVETP----------QGKCDIFNGSWIRNPSGPIYT 382
                  + K + +E    +   + V+ P            KCDIF G WI +PSGP+YT
Sbjct: 60  TESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDWIPDPSGPVYT 119

Query: 383 NESCTVIQQHQNCMTNGRPDSGYLY 457
           NESC  I+ HQNCM NGRPDSGYLY
Sbjct: 120 NESCHAIENHQNCMRNGRPDSGYLY 144


>emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]
          Length = 486

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 21/143 (14%)
 Frame = +2

Query: 92  KELKFEVNPIWSFRKHNHLFVKFTLSIFVMCLAFRLFSSRSIEVPPPITQIPTV------ 253
           +E++FE+NP +S  +HNH FVK  L   +M LA RL+ S SI     +  + T       
Sbjct: 40  REMRFEMNP-FSLHQHNHTFVKCALCFVLMGLAVRLWFSDSIRFSSAVDSVETPPEGKTE 98

Query: 254 -----DNKDDGVEQDNELLPQIVVETP----------QGKCDIFNGSWIRNPSGPIYTNE 388
                + K + +E    +   + V+ P            KCDIF G WI +PSGP+YTNE
Sbjct: 99  SLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDWIPDPSGPVYTNE 158

Query: 389 SCTVIQQHQNCMTNGRPDSGYLY 457
           SC  I+ HQNCM NGRPDSGYLY
Sbjct: 159 SCHXIENHQNCMRNGRPDSGYLY 181


>ref|XP_003548491.1| PREDICTED: uncharacterized protein LOC100794524 [Glycine max]
          Length = 439

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 16/140 (11%)
 Frame = +2

Query: 86  MGKELKFEVNPIWSFRKHNHLFVKFTLSIFVMCLAFRL-------FSSRSIEVPPPITQI 244
           M K ++ +  P+ S +KHNH  VK  +SIF++ LAFRL       FSS  +E PPP+   
Sbjct: 1   MVKRVRSDSGPL-SLQKHNHWCVKLGVSIFLVGLAFRLLLWDSFSFSSVVVETPPPLEDA 59

Query: 245 PTVD---------NKDDGVEQDNELLPQIVVETPQGKCDIFNGSWIRNPSGPIYTNESCT 397
             V          + D+  E D ++  QI   +   KCD+F G W+++ SGP+YTNESC 
Sbjct: 60  KAVSPVFSSSVLQDSDEFPENDQKIQTQI---SKNEKCDLFVGDWVQDLSGPVYTNESCR 116

Query: 398 VIQQHQNCMTNGRPDSGYLY 457
           VI+ HQNCM NGRPDS YLY
Sbjct: 117 VIEPHQNCMKNGRPDSEYLY 136


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