BLASTX nr result

ID: Coptis25_contig00030984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030984
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003962972.1| PREDICTED: cyclin-dependent kinase 16-like [...    61   8e-08
ref|XP_003457667.1| PREDICTED: cyclin-dependent kinase 16 [Oreoc...    60   2e-07
ref|XP_001521338.2| PREDICTED: cyclin-dependent kinase 16 [Ornit...    60   2e-07
ref|XP_002173063.1| Pho85/PhoA-like cyclin-dependent kinase Pef1...    60   2e-07
ref|XP_001335575.1| PREDICTED: cyclin-dependent kinase 16 [Danio...    60   2e-07

>ref|XP_003962972.1| PREDICTED: cyclin-dependent kinase 16-like [Takifugu rubripes]
          Length = 597

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 39/149 (26%)
 Frame = +1

Query: 25  RRSLTSKDLKLENILVNFKDWELKLADFGQSWQFIIPTEVYTLNVCTTPYRAPELLLDFK 204
           RR +  +DLK +N+L+N +  ELKLADFG +    IPT+ Y+  V T  YR P++LL   
Sbjct: 264 RRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 322

Query: 205 DY------------------------------------MLLGTPVDNLWP---RTNKXXX 267
           DY                                     LLGTP ++ WP      +   
Sbjct: 323 DYSTHIDMWGVGCIFYEMVTGRPLFPGSTVEEELHFIFKLLGTPTEHTWPGISSNEEFVA 382

Query: 268 XXXXXXXXPELSSHFPLLDGNGVNLLSVY 354
                    +LS+H P L   GV+LLS +
Sbjct: 383 YNYPQYRADKLSNHTPRLSSEGVDLLSKF 411


>ref|XP_003457667.1| PREDICTED: cyclin-dependent kinase 16 [Oreochromis niloticus]
          Length = 518

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 39/149 (26%)
 Frame = +1

Query: 25  RRSLTSKDLKLENILVNFKDWELKLADFGQSWQFIIPTEVYTLNVCTTPYRAPELLLDFK 204
           RR +  +DLK +N+L+N +  ELKLADFG +    IPT+ Y+  V T  YR P++LL   
Sbjct: 300 RRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 358

Query: 205 DY------------------------------------MLLGTPVDNLWP--RTNKXXXX 270
           DY                                     LLGTP +  WP   +N+    
Sbjct: 359 DYSTHIDMWGVGCIFYEMATGRPLFPGSTVEEELHFIFKLLGTPTEQTWPGITSNEEFVA 418

Query: 271 XXXXXXXPE-LSSHFPLLDGNGVNLLSVY 354
                   E LS+H P L   GV LLS +
Sbjct: 419 FNYPQYRAERLSNHTPRLSTEGVELLSEF 447


>ref|XP_001521338.2| PREDICTED: cyclin-dependent kinase 16 [Ornithorhynchus anatinus]
          Length = 440

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 39/147 (26%)
 Frame = +1

Query: 25  RRSLTSKDLKLENILVNFKDWELKLADFGQSWQFIIPTEVYTLNVCTTPYRAPELLLDFK 204
           R+ +  +DLK +N+L+N +  ELKLADFG +    IPT+ Y+  V T  YR P++LL   
Sbjct: 223 RQKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 281

Query: 205 DY------------------------------------MLLGTPVDNLWP--RTNKXXXX 270
           DY                                     +LGTP +  WP   +N+    
Sbjct: 282 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 341

Query: 271 XXXXXXXPE-LSSHFPLLDGNGVNLLS 348
                  PE L SH P LD +G +LL+
Sbjct: 342 YNYPKYRPEALLSHAPRLDNDGADLLA 368


>ref|XP_002173063.1| Pho85/PhoA-like cyclin-dependent kinase Pef1 [Schizosaccharomyces
           japonicus yFS275] gi|212001110|gb|EEB06770.1|
           Pho85/PhoA-like cyclin-dependent kinase Pef1
           [Schizosaccharomyces japonicus yFS275]
          Length = 288

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 38/139 (27%)
 Frame = +1

Query: 43  KDLKLENILVNFKDWELKLADFGQSWQFIIPTEVYTLNVCTTPYRAPELLLDFKDY---- 210
           +DLK +N+L+N +  ELKLADFG +  F IP   ++  V T  YRAP++L+  ++Y    
Sbjct: 125 RDLKPQNLLINHRG-ELKLADFGLARSFGIPVNTFSNEVVTLWYRAPDVLMGSRNYTTSI 183

Query: 211 --------------------------------MLLGTPVDNLWPRTNKXXXXXXXXXXXP 294
                                            L+GTP +  WP  ++           P
Sbjct: 184 DMWSVGCILAELITGRPLFPGTDNEDQLLKIFRLMGTPTEQTWPGVSRLPDYKPTFPFYP 243

Query: 295 --ELSSHFPLLDGNGVNLL 345
             +L+S FP LDG G++LL
Sbjct: 244 PQDLASMFPGLDGLGLDLL 262


>ref|XP_001335575.1| PREDICTED: cyclin-dependent kinase 16 [Danio rerio]
          Length = 524

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 39/147 (26%)
 Frame = +1

Query: 25  RRSLTSKDLKLENILVNFKDWELKLADFGQSWQFIIPTEVYTLNVCTTPYRAPELLLDFK 204
           RR +  +DLK +N+L+N +  ELKLADFG +    IPT+ Y+  V T  YR P++LL   
Sbjct: 307 RRKVLHRDLKPQNLLINDRG-ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 365

Query: 205 DY------------------------------------MLLGTPVDNLWP--RTNKXXXX 270
           DY                                     LLGTP +  WP   +N+    
Sbjct: 366 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEELHFIFKLLGTPTEETWPGITSNEEFIS 425

Query: 271 XXXXXXXPE-LSSHFPLLDGNGVNLLS 348
                   + L +H P LD +GV LLS
Sbjct: 426 YNYPRYRADCLHNHTPRLDNDGVELLS 452


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