BLASTX nr result
ID: Coptis25_contig00030975
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030975 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum] 145 4e-56 dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana... 146 2e-55 ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso... 145 3e-55 ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso... 145 3e-55 ref|XP_004161364.1| PREDICTED: LOW QUALITY PROTEIN: long chain b... 145 4e-55 >emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum] Length = 489 Score = 145 bits (365), Expect(2) = 4e-56 Identities = 68/77 (88%), Positives = 75/77 (97%) Frame = +1 Query: 1 VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180 VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LIEYLKY+CPAHLY T+ISPPAAQQ Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIEYLKYSCPAHLYATSISPPAAQQ 350 Query: 181 ILSAIKVILGEDGSRRG 231 I+SAIKVILGEDG+ RG Sbjct: 351 IISAIKVILGEDGTSRG 367 Score = 98.2 bits (243), Expect(2) = 4e-56 Identities = 46/50 (92%), Positives = 49/50 (98%) Frame = +3 Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404 GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIMIYNPGKIPAFSR Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSR 416 >dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum] gi|159506876|gb|ABW97709.1| serine palmitoyltransferase long chain base subunit [Nicotiana benthamiana] Length = 489 Score = 146 bits (368), Expect(2) = 2e-55 Identities = 69/77 (89%), Positives = 75/77 (97%) Frame = +1 Query: 1 VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180 VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LIE+LKYTCPAHLY T+ISPPAAQQ Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIEFLKYTCPAHLYATSISPPAAQQ 350 Query: 181 ILSAIKVILGEDGSRRG 231 I+SAIKVILGEDGS RG Sbjct: 351 IISAIKVILGEDGSSRG 367 Score = 95.1 bits (235), Expect(2) = 2e-55 Identities = 44/50 (88%), Positives = 48/50 (96%) Frame = +3 Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404 GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 >ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera] gi|297734488|emb|CBI15735.3| unnamed protein product [Vitis vinifera] Length = 513 Score = 145 bits (366), Expect(2) = 3e-55 Identities = 68/77 (88%), Positives = 75/77 (97%) Frame = +1 Query: 1 VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180 VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ Sbjct: 315 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQ 374 Query: 181 ILSAIKVILGEDGSRRG 231 I+S+IKVILGEDGS RG Sbjct: 375 IISSIKVILGEDGSSRG 391 Score = 95.1 bits (235), Expect(2) = 3e-55 Identities = 44/50 (88%), Positives = 48/50 (96%) Frame = +3 Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404 GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR Sbjct: 391 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 440 >ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera] Length = 489 Score = 145 bits (366), Expect(2) = 3e-55 Identities = 68/77 (88%), Positives = 75/77 (97%) Frame = +1 Query: 1 VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180 VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQ 350 Query: 181 ILSAIKVILGEDGSRRG 231 I+S+IKVILGEDGS RG Sbjct: 351 IISSIKVILGEDGSSRG 367 Score = 95.1 bits (235), Expect(2) = 3e-55 Identities = 44/50 (88%), Positives = 48/50 (96%) Frame = +3 Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404 GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 >ref|XP_004161364.1| PREDICTED: LOW QUALITY PROTEIN: long chain base biosynthesis protein 2a-like [Cucumis sativus] Length = 490 Score = 145 bits (365), Expect(2) = 4e-55 Identities = 68/77 (88%), Positives = 75/77 (97%) Frame = +1 Query: 1 VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180 VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIKYLKYTCPAHLYATSISPPAAQQ 350 Query: 181 ILSAIKVILGEDGSRRG 231 I+S+IKVILGEDGS RG Sbjct: 351 IISSIKVILGEDGSSRG 367 Score = 95.1 bits (235), Expect(2) = 4e-55 Identities = 44/50 (88%), Positives = 48/50 (96%) Frame = +3 Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404 GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416