BLASTX nr result

ID: Coptis25_contig00030975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030975
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]       145   4e-56
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...   146   2e-55
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...   145   3e-55
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...   145   3e-55
ref|XP_004161364.1| PREDICTED: LOW QUALITY PROTEIN: long chain b...   145   4e-55

>emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]
          Length = 489

 Score =  145 bits (365), Expect(2) = 4e-56
 Identities = 68/77 (88%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180
           VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LIEYLKY+CPAHLY T+ISPPAAQQ
Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIEYLKYSCPAHLYATSISPPAAQQ 350

Query: 181 ILSAIKVILGEDGSRRG 231
           I+SAIKVILGEDG+ RG
Sbjct: 351 IISAIKVILGEDGTSRG 367



 Score = 98.2 bits (243), Expect(2) = 4e-56
 Identities = 46/50 (92%), Positives = 49/50 (98%)
 Frame = +3

Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404
           GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIMIYNPGKIPAFSR
Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSR 416


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score =  146 bits (368), Expect(2) = 2e-55
 Identities = 69/77 (89%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180
           VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LIE+LKYTCPAHLY T+ISPPAAQQ
Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIEFLKYTCPAHLYATSISPPAAQQ 350

Query: 181 ILSAIKVILGEDGSRRG 231
           I+SAIKVILGEDGS RG
Sbjct: 351 IISAIKVILGEDGSSRG 367



 Score = 95.1 bits (235), Expect(2) = 2e-55
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404
           GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR
Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  145 bits (366), Expect(2) = 3e-55
 Identities = 68/77 (88%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180
           VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ
Sbjct: 315 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQ 374

Query: 181 ILSAIKVILGEDGSRRG 231
           I+S+IKVILGEDGS RG
Sbjct: 375 IISSIKVILGEDGSSRG 391



 Score = 95.1 bits (235), Expect(2) = 3e-55
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404
           GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR
Sbjct: 391 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 440


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score =  145 bits (366), Expect(2) = 3e-55
 Identities = 68/77 (88%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180
           VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ
Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQ 350

Query: 181 ILSAIKVILGEDGSRRG 231
           I+S+IKVILGEDGS RG
Sbjct: 351 IISSIKVILGEDGSSRG 367



 Score = 95.1 bits (235), Expect(2) = 3e-55
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404
           GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR
Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416


>ref|XP_004161364.1| PREDICTED: LOW QUALITY PROTEIN: long chain base biosynthesis
           protein 2a-like [Cucumis sativus]
          Length = 490

 Score =  145 bits (365), Expect(2) = 4e-55
 Identities = 68/77 (88%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   VCELLGVNTADVDVMMGTFTKSFGSCGGYIAGSKKLIEYLKYTCPAHLYGTAISPPAAQQ 180
           VCELLGV+TADVD+MMGTFTKSFGSCGGYIAGSK+LI+YLKYTCPAHLY T+ISPPAAQQ
Sbjct: 291 VCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIKYLKYTCPAHLYATSISPPAAQQ 350

Query: 181 ILSAIKVILGEDGSRRG 231
           I+S+IKVILGEDGS RG
Sbjct: 351 IISSIKVILGEDGSSRG 367



 Score = 95.1 bits (235), Expect(2) = 4e-55
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 255 GAQKLTRIRENSNFFRSELQKLGFKVLGDNDSPVIPIMIYNPGKIPAFSR 404
           GAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP KIPAFSR
Sbjct: 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416


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