BLASTX nr result

ID: Coptis25_contig00030968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030968
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17894.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trich...    89   9e-16
emb|CAN62805.1| hypothetical protein VITISV_033697 [Vitis vinifera]    83   5e-14
ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trich...    82   9e-14
ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trich...    82   1e-13

>emb|CBI17894.3| unnamed protein product [Vitis vinifera]
          Length = 982

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
 Frame = -1

Query: 451 MPIVT---EAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 281
           M IVT     G  L  PV  Q+GYLVH K+N+ENL+ QV  LEA + D Q  V  +    
Sbjct: 1   MDIVTFIWGVGTKLWGPVTHQIGYLVHYKKNLENLKAQVEALEALRKDNQESVRAAEMNG 60

Query: 280 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 101
           EE K +VQ WL+   +     ++++ +    K    GCC D   RYK+S++AV+  + I 
Sbjct: 61  EEIKAQVQIWLKGADAAIVEVEKVIDDFKLNKRCFWGCCPDCTSRYKLSRKAVKDAVTIG 120

Query: 100 ELLEKGNFDSVSL 62
           EL +KG FD VSL
Sbjct: 121 ELQDKGKFDRVSL 133


>ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838884|gb|EEE77235.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1337

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 48/132 (36%), Positives = 80/132 (60%)
 Frame = -1

Query: 460 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 281
           +I++ IV +  + L  P+ RQ+GY++ C  NI+NL+++V  L   KT V   +EE+I + 
Sbjct: 2   EIVISIVAKVAELLVVPIKRQIGYVIDCNTNIQNLKNEVEKLTYAKTRVIHSIEEAISKG 61

Query: 280 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 101
           EE + +V+ WL +V         +VG+ +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVDVENWLGSVDGVIEGGCGVVGDESSKKCFM-GLCPDLKIRYRLGKAAKEELTVVV 120

Query: 100 ELLEKGNFDSVS 65
           +L EKG FD VS
Sbjct: 121 DLQEKGKFDRVS 132


>emb|CAN62805.1| hypothetical protein VITISV_033697 [Vitis vinifera]
          Length = 386

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 47/131 (35%), Positives = 73/131 (55%)
 Frame = -1

Query: 454 LMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRLEE 275
           ++  + E    L +PV  Q+GYLVH  +N+ENL  +V  LEA + D +  V  +    EE
Sbjct: 3   IVTFILEVVDKLWEPVGNQIGYLVHYXKNVENLNAEVETLEALRKDNRESVRAAEVNGEE 62

Query: 274 PKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIKEL 95
            K +V+ WLE   +  A  + +  +    K  + GC  DW  RY++SK+AV+  + I EL
Sbjct: 63  IKADVRTWLERADAAIAEVERVNDDFKLNKXCLWGCFPDWISRYRLSKRAVKDKVTIGEL 122

Query: 94  LEKGNFDSVSL 62
            ++G F+ VSL
Sbjct: 123 QDQGKFEXVSL 133


>ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834264|gb|EEE72741.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1315

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 47/132 (35%), Positives = 77/132 (58%)
 Frame = -1

Query: 460 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 281
           +I++ IV +  + L  P+ RQ+GY+++C  NI+NL+++V  L   +T V   +EE+ R  
Sbjct: 2   EIVISIVAKVAELLVVPIKRQIGYVLNCNTNIQNLKNEVEKLTDARTRVNHSIEEARRNG 61

Query: 280 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 101
           EE + EV  WL +V          V + +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVEVFNWLGSVDGVIDGGGGGVADESSKKCFM-GLCPDLKIRYRLGKAAKKELTVVV 120

Query: 100 ELLEKGNFDSVS 65
           +L EKG FD VS
Sbjct: 121 DLQEKGRFDRVS 132


>ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834261|gb|EEE72738.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1340

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 46/132 (34%), Positives = 76/132 (57%)
 Frame = -1

Query: 460 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 281
           + ++ IV    + L  P+ RQ+GY++ C  NI+NL+++V  L   KT V   +EE+ R  
Sbjct: 2   EFVISIVATVAELLVVPIKRQIGYVLDCNTNIQNLKNEVEKLTDAKTRVNHSIEEARRNG 61

Query: 280 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 101
           EE + +V+ WL +V+        +V + +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVDVENWLTSVNGVIGGGGGVVVDESSKKCFM-GLCPDLKLRYRLGKAAKKELTVVV 120

Query: 100 ELLEKGNFDSVS 65
            L EKG FD VS
Sbjct: 121 NLQEKGKFDRVS 132


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