BLASTX nr result

ID: Coptis25_contig00030953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030953
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW84598.1| phytoene synthase 2 isoform 1 [Zea mays] gi|41395...    67   1e-09
gb|ACL54631.1| unknown [Zea mays]                                      67   1e-09
gb|AAS02284.1| phytoene synthase 2 [Zea mays]                          67   1e-09
gb|AAR86104.1| phytoene synthase [Momordica charantia subsp. cha...    67   1e-09
ref|NP_001108117.1| phytoene synthase2 [Zea mays] gi|37499616|gb...    67   1e-09

>gb|AFW84598.1| phytoene synthase 2 isoform 1 [Zea mays]
           gi|413951950|gb|AFW84599.1| phytoene synthase 2 isoform
           2 [Zea mays]
          Length = 272

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 245 QILDVIEANHYNNFTKRAYVGKAKKLMYLPMAYARALTIP 126
           QILD IEAN YNNFTKRAYVGKAKKL+ LP+AYARA   P
Sbjct: 233 QILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYARAAVAP 272


>gb|ACL54631.1| unknown [Zea mays]
          Length = 272

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 245 QILDVIEANHYNNFTKRAYVGKAKKLMYLPMAYARALTIP 126
           QILD IEAN YNNFTKRAYVGKAKKL+ LP+AYARA   P
Sbjct: 233 QILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYARAAVAP 272


>gb|AAS02284.1| phytoene synthase 2 [Zea mays]
          Length = 394

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 245 QILDVIEANHYNNFTKRAYVGKAKKLMYLPMAYARALTIP 126
           QILD IEAN YNNFTKRAYVGKAKKL+ LP+AYARA   P
Sbjct: 355 QILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYARAAVAP 394


>gb|AAR86104.1| phytoene synthase [Momordica charantia subsp. charantia]
          Length = 412

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = -3

Query: 245 QILDVIEANHYNNFTKRAYVGKAKKLMYLPMAYARALTIPS 123
           QILD IEAN YNNFTKRAYV KAKKLM LPMAYAR+L  PS
Sbjct: 372 QILDEIEANDYNNFTKRAYVSKAKKLMALPMAYARSLMGPS 412


>ref|NP_001108117.1| phytoene synthase2 [Zea mays] gi|37499616|gb|AAQ91837.1| phytoene
           synthase 2 [Zea mays] gi|60101462|gb|AAX13807.1|
           phytoene synthase 2 [Zea mays]
           gi|194701490|gb|ACF84829.1| unknown [Zea mays]
           gi|219884359|gb|ACL52554.1| unknown [Zea mays]
           gi|413951951|gb|AFW84600.1| phytoene synthase 2 [Zea
           mays]
          Length = 402

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 245 QILDVIEANHYNNFTKRAYVGKAKKLMYLPMAYARALTIP 126
           QILD IEAN YNNFTKRAYVGKAKKL+ LP+AYARA   P
Sbjct: 363 QILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYARAAVAP 402


Top