BLASTX nr result

ID: Coptis25_contig00030925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030925
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146923.1| PREDICTED: inactive TPR repeat-containing th...    87   2e-15
ref|XP_003537569.1| PREDICTED: TPR repeat-containing thioredoxin...    85   5e-15
ref|XP_002533142.1| Tetratricopeptide repeat protein, putative [...    84   9e-15
ref|XP_002306314.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002873437.1| tetratricopeptide repeat-containing protein ...    84   2e-14

>ref|XP_004146923.1| PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like
           [Cucumis sativus] gi|449522746|ref|XP_004168387.1|
           PREDICTED: inactive TPR repeat-containing thioredoxin
           TTL3-like [Cucumis sativus]
          Length = 600

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = -1

Query: 267 RQDNDTTGSLCRALSTRMDPEQLKMLGNEDFKEGRFXXXXXXXXXXXXIDPSKASFRSNK 88
           +Q  + TGSLCR LSTRMDPEQLK++GNED+K GRF            IDP+KAS+RSNK
Sbjct: 227 KQSVEQTGSLCRVLSTRMDPEQLKIMGNEDYKNGRFAEALALYEAAIAIDPNKASYRSNK 286

Query: 87  SAALTSLG 64
           SAALT+LG
Sbjct: 287 SAALTALG 294


>ref|XP_003537569.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 582

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = -1

Query: 267 RQDNDTTGSLCRALSTRMDPEQLKMLGNEDFKEGRFXXXXXXXXXXXXIDPSKASFRSNK 88
           +   + +GSLCRA+STRMDPEQLK++GNED+K GRF            IDP+KAS+RSN+
Sbjct: 209 KPSKEQSGSLCRAVSTRMDPEQLKIMGNEDYKNGRFAEALALYDAAIAIDPNKASYRSNR 268

Query: 87  SAALTSLGR 61
           SAALT+LGR
Sbjct: 269 SAALTALGR 277


>ref|XP_002533142.1| Tetratricopeptide repeat protein, putative [Ricinus communis]
           gi|223527053|gb|EEF29238.1| Tetratricopeptide repeat
           protein, putative [Ricinus communis]
          Length = 622

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/62 (67%), Positives = 48/62 (77%)
 Frame = -1

Query: 246 GSLCRALSTRMDPEQLKMLGNEDFKEGRFXXXXXXXXXXXXIDPSKASFRSNKSAALTSL 67
           GSLCRALSTRMDPEQLK++GNED+K G F            IDP+KAS+RSNKSAALT+L
Sbjct: 243 GSLCRALSTRMDPEQLKIMGNEDYKNGNFAEALALYDAAISIDPNKASYRSNKSAALTAL 302

Query: 66  GR 61
           GR
Sbjct: 303 GR 304


>ref|XP_002306314.1| predicted protein [Populus trichocarpa] gi|222855763|gb|EEE93310.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -1

Query: 249 TGSLCRALSTRMDPEQLKMLGNEDFKEGRFXXXXXXXXXXXXIDPSKASFRSNKSAALTS 70
           +GSLCRALSTRMDPEQLKM+GNED+K G F            IDP+KAS+RSN+SAALT+
Sbjct: 201 SGSLCRALSTRMDPEQLKMMGNEDYKNGNFAEALALYNAAISIDPNKASYRSNRSAALTA 260

Query: 69  LGR 61
           LG+
Sbjct: 261 LGK 263


>ref|XP_002873437.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319274|gb|EFH49696.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 593

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/67 (61%), Positives = 49/67 (73%)
 Frame = -1

Query: 261 DNDTTGSLCRALSTRMDPEQLKMLGNEDFKEGRFXXXXXXXXXXXXIDPSKASFRSNKSA 82
           + D +GSLCRA+STRMDPE LK++GNED+K G F            IDP KAS+RSNKSA
Sbjct: 219 NQDQSGSLCRAISTRMDPETLKIMGNEDYKNGNFAEALALYEAAISIDPKKASYRSNKSA 278

Query: 81  ALTSLGR 61
           ALT+LGR
Sbjct: 279 ALTALGR 285


Top