BLASTX nr result

ID: Coptis25_contig00030915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030915
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07322.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07
ref|XP_004173298.1| PREDICTED: uncharacterized WD repeat-contain...    57   1e-06
ref|XP_004150657.1| PREDICTED: uncharacterized WD repeat-contain...    57   1e-06
ref|XP_003557806.1| PREDICTED: uncharacterized WD repeat-contain...    57   1e-06
ref|XP_002893910.1| hypothetical protein ARALYDRAFT_314047 [Arab...    57   1e-06

>dbj|BAK07322.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -3

Query: 252 DYSFASAWHLVGRILASSN*DSTCRLWDMTNPSQS 148
           DYSFASAWH  GR+LA+ N D TCRLWD+ NPS++
Sbjct: 183 DYSFASAWHPDGRVLATGNQDRTCRLWDVRNPSEA 217


>ref|XP_004173298.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like isoform 3 [Cucumis sativus]
          Length = 299

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 255 LDYSFASAWHLVGRILASSN*DSTCRLWDMTNPSQS 148
           LDYSFASAWH  GRILA+ N D TCRLWD+ N S+S
Sbjct: 171 LDYSFASAWHPDGRILATGNQDRTCRLWDIRNTSKS 206


>ref|XP_004150657.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
          Length = 451

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -3

Query: 255 LDYSFASAWHLVGRILASSN*DSTCRLWDMTNPSQS 148
           LDYSFASAWH  GRILA+ N D TCRLWD+ N S+S
Sbjct: 323 LDYSFASAWHPDGRILATGNQDRTCRLWDIRNTSKS 358


>ref|XP_003557806.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Brachypodium distachyon]
          Length = 436

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -3

Query: 255 LDYSFASAWHLVGRILASSN*DSTCRLWDMTNPSQS 148
           LDYSF+SAWH  GR+LA+ N D TCRLWD+ N SQS
Sbjct: 305 LDYSFSSAWHPDGRVLATGNQDRTCRLWDVRNTSQS 340


>ref|XP_002893910.1| hypothetical protein ARALYDRAFT_314047 [Arabidopsis lyrata subsp.
           lyrata] gi|297339752|gb|EFH70169.1| hypothetical protein
           ARALYDRAFT_314047 [Arabidopsis lyrata subsp. lyrata]
          Length = 399

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -3

Query: 252 DYSFASAWHLVGRILASSN*DSTCRLWDMTNPSQS 148
           DYSFASAWH  G ILA+ N D+TCRLWD+ NPS+S
Sbjct: 272 DYSFASAWHPNGLILATGNQDTTCRLWDIRNPSES 306


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