BLASTX nr result

ID: Coptis25_contig00030890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030890
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518200.1| Carboxyl-terminal-processing protease precur...   178   5e-43
ref|XP_002311704.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
emb|CAN62705.1| hypothetical protein VITISV_005100 [Vitis vinifera]   169   3e-40
ref|XP_002285561.1| PREDICTED: carboxyl-terminal-processing prot...   168   4e-40
ref|XP_004172569.1| PREDICTED: C-terminal processing peptidase, ...   167   8e-40

>ref|XP_002518200.1| Carboxyl-terminal-processing protease precursor, putative [Ricinus
           communis] gi|223542796|gb|EEF44333.1|
           Carboxyl-terminal-processing protease precursor,
           putative [Ricinus communis]
          Length = 407

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = -3

Query: 324 SLVELTIQSGPDVKHMSLKREKVSLNPVKSRLCEVAAGGKGTSRIGYIKLTTFNQNASNA 145
           S V+LTI+SGP+ KH++L REKVSLNPVKSRLCE+ A GK + RIGYIKLTTFNQNAS A
Sbjct: 169 SSVKLTIRSGPETKHLALTREKVSLNPVKSRLCEIPASGKDSPRIGYIKLTTFNQNASGA 228

Query: 144 VKDAIETLRRNNVNAFVLDLRDNSGGLFPEGIEIAKIWLKKGIIVYIC 1
           VK+AI TLR NNV+AFVLDLRDNSGGLFPEGIEIAKIWL KG+IVYIC
Sbjct: 229 VKEAISTLRSNNVDAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYIC 276


>ref|XP_002311704.1| predicted protein [Populus trichocarpa] gi|222851524|gb|EEE89071.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/108 (77%), Positives = 95/108 (87%)
 Frame = -3

Query: 324 SLVELTIQSGPDVKHMSLKREKVSLNPVKSRLCEVAAGGKGTSRIGYIKLTTFNQNASNA 145
           S VELTI+SG ++KH++L REKVSLNPVKSRLC +   GK + RIGYIKLTTFNQNAS A
Sbjct: 166 SSVELTIRSGQEIKHLALTREKVSLNPVKSRLCVIPGSGKDSPRIGYIKLTTFNQNASGA 225

Query: 144 VKDAIETLRRNNVNAFVLDLRDNSGGLFPEGIEIAKIWLKKGIIVYIC 1
           +++AI TLR NNVNAFVLDLRDNSGGLFPEGIEIAKIWL KG+IVYIC
Sbjct: 226 IREAINTLRSNNVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYIC 273


>emb|CAN62705.1| hypothetical protein VITISV_005100 [Vitis vinifera]
          Length = 393

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/108 (75%), Positives = 97/108 (89%)
 Frame = -3

Query: 324 SLVELTIQSGPDVKHMSLKREKVSLNPVKSRLCEVAAGGKGTSRIGYIKLTTFNQNASNA 145
           S VELTI+SGP+VK +SL RE+VSLNPVKSRLC++   GK + +IGYIKL +FNQNAS A
Sbjct: 155 SSVELTIRSGPEVKRLSLMRERVSLNPVKSRLCKMPGLGKDSPKIGYIKLASFNQNASGA 214

Query: 144 VKDAIETLRRNNVNAFVLDLRDNSGGLFPEGIEIAKIWLKKGIIVYIC 1
           VK+AIE+LR N+VNAFVLDLRDNSGGLFPEG+EIAKIWL+KG+IVYIC
Sbjct: 215 VKEAIESLRSNDVNAFVLDLRDNSGGLFPEGVEIAKIWLEKGVIVYIC 262


>ref|XP_002285561.1| PREDICTED: carboxyl-terminal-processing protease [Vitis vinifera]
           gi|296088261|emb|CBI35769.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/108 (75%), Positives = 97/108 (89%)
 Frame = -3

Query: 324 SLVELTIQSGPDVKHMSLKREKVSLNPVKSRLCEVAAGGKGTSRIGYIKLTTFNQNASNA 145
           S VELTI+SGP+VK +SL RE+VSLNPVKSRLC++   GK + +IGYIKL +FNQNAS A
Sbjct: 259 SSVELTIRSGPEVKSLSLMRERVSLNPVKSRLCKMPGLGKDSPKIGYIKLASFNQNASGA 318

Query: 144 VKDAIETLRRNNVNAFVLDLRDNSGGLFPEGIEIAKIWLKKGIIVYIC 1
           VK+AIE+LR N+VNAFVLDLRDNSGGLFPEG+EIAKIWL+KG+IVYIC
Sbjct: 319 VKEAIESLRSNDVNAFVLDLRDNSGGLFPEGVEIAKIWLEKGVIVYIC 366


>ref|XP_004172569.1| PREDICTED: C-terminal processing peptidase, chloroplastic-like
           [Cucumis sativus]
          Length = 540

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/108 (74%), Positives = 94/108 (87%)
 Frame = -3

Query: 324 SLVELTIQSGPDVKHMSLKREKVSLNPVKSRLCEVAAGGKGTSRIGYIKLTTFNQNASNA 145
           S V+LTIQSGP VKH+ L REKV+LNPVKSR+CE+   G  +S+IGYIKLT+F Q AS A
Sbjct: 302 SSVQLTIQSGPSVKHLDLVREKVALNPVKSRICELPGSGNDSSKIGYIKLTSFTQKASGA 361

Query: 144 VKDAIETLRRNNVNAFVLDLRDNSGGLFPEGIEIAKIWLKKGIIVYIC 1
           VK+AI++LR N+VNAFVLDLRDNSGGLFPEG+EIAKIWL KG+IVYIC
Sbjct: 362 VKEAIDSLRSNSVNAFVLDLRDNSGGLFPEGVEIAKIWLDKGVIVYIC 409


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