BLASTX nr result

ID: Coptis25_contig00030881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030881
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510354.1| protein phosphatase 2c, putative [Ricinus co...    60   2e-07

>ref|XP_002510354.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223551055|gb|EEF52541.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 512

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = +1

Query: 1   RSDFDVLSQQKNLSFVEALSRTFS-----GPHLRLCGHHIDHLLSGPPQVSPESVLQRLP 165
           +SD  ++++++N+S V ALSRTFS     GP  ++CG+HID  LSG  QVS    LQ+  
Sbjct: 73  QSDLQLVNRKRNISVVGALSRTFSVPSVSGPSFQVCGYHIDRALSGTTQVSDSGKLQKRL 132

Query: 166 SAVACDSRALLSDLCVEN 219
            A AC S++++    +EN
Sbjct: 133 MA-ACASKSVIGGCLLEN 149


Top