BLASTX nr result
ID: Coptis25_contig00030871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030871 (666 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_006291790.1| orf28 gene product (mitochondrion) [Daucus c... 66 1e-11 >ref|YP_006291790.1| orf28 gene product (mitochondrion) [Daucus carota subsp. sativus] gi|374081974|gb|AEY81166.1| orf28 (mitochondrion) [Daucus carota subsp. sativus] Length = 124 Score = 66.2 bits (160), Expect(2) = 1e-11 Identities = 37/64 (57%), Positives = 40/64 (62%) Frame = +1 Query: 187 NPARINNEAIQELLALLSSTRAMPSLAFGXXXXXXXXXXXXIGWR*GFPVVLVLIIYLIS 366 NPARINN+ + ELLALL R +P IGWR GFPVVLVLIIYLIS Sbjct: 9 NPARINNDEVPELLALLELCRLLP----------LGRCPSSIGWRWGFPVVLVLIIYLIS 58 Query: 367 PARH 378 PARH Sbjct: 59 PARH 62 Score = 29.3 bits (64), Expect(2) = 1e-11 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +2 Query: 374 GMS*LFRCELRFTRS 418 GM LFRCELRFTRS Sbjct: 63 GMPSLFRCELRFTRS 77