BLASTX nr result

ID: Coptis25_contig00030869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030869
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283128.1| PREDICTED: uncharacterized protein LOC100257...    75   7e-12
ref|XP_002313640.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805...    64   1e-08
ref|NP_172123.1| Plant Tudor-like protein [Arabidopsis thaliana]...    64   2e-08
ref|XP_003527348.1| PREDICTED: uncharacterized protein LOC100808...    64   2e-08

>ref|XP_002283128.1| PREDICTED: uncharacterized protein LOC100257263 [Vitis vinifera]
          Length = 160

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = -2

Query: 370 LRLVALYDNEGWWVGRIVGRTSN-QYHVYFQSSDEKLAYPVDRLRVHQEWKNGMW 209
           L  V  +DN+GWWVGRI G   + +Y VYF+SS ++LAYP+ RLRVHQEW++G W
Sbjct: 102 LDTVDAFDNDGWWVGRISGSYEDGKYFVYFESSGDELAYPIHRLRVHQEWEDGQW 156


>ref|XP_002313640.1| predicted protein [Populus trichocarpa] gi|222850048|gb|EEE87595.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = -2

Query: 361 VALYDNEGWWVGRIVGRTSNQYHVYFQSSDEKLAYPVDRLRVHQEWKNGMW 209
           V  +DN+GWW G++ G+    Y VYF+++ +++ Y V RLR+H +W NG W
Sbjct: 81  VDAFDNDGWWAGKVTGQRGPLYFVYFETTGDEIGYHVSRLRIHLDWANGKW 131


>ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805066 [Glycine max]
          Length = 142

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -2

Query: 361 VALYDNEGWWVGRIVGRTSNQ-YHVYFQSSDEKLAYPVDRLRVHQEWKNGMW 209
           V  +DN+GWW+G+I G+   + Y+VYF +++E++AY V  +RVH EW +G W
Sbjct: 87  VDAFDNDGWWLGQITGKKDGEHYYVYFSTTNEEIAYHVSGIRVHHEWSHGEW 138


>ref|NP_172123.1| Plant Tudor-like protein [Arabidopsis thaliana]
           gi|8927671|gb|AAF82162.1|AC068143_4 Contains similarity
           to a hypothetical protein T31J12.4 gi|4337176 from
           Arabidopsis thaliana BAC T31J12 gb|AC006416 [Arabidopsis
           thaliana] gi|149944367|gb|ABR46226.1| At1g06340
           [Arabidopsis thaliana] gi|332189855|gb|AEE27976.1| Plant
           Tudor-like protein [Arabidopsis thaliana]
          Length = 134

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = -2

Query: 361 VALYDNEGWWVGRIVGRTSNQYHVYFQSSDEKLAYPVDRLRVHQEWKNGMW 209
           V  +D +GWWVG +     N Y VYF ++DE+L YP+  LR H EW NG W
Sbjct: 81  VDAFDKDGWWVGEVTAVRRNIYSVYFSTTDEELEYPLYSLRKHHEWVNGSW 131


>ref|XP_003527348.1| PREDICTED: uncharacterized protein LOC100808474 [Glycine max]
          Length = 142

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 23/52 (44%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -2

Query: 361 VALYDNEGWWVGRIVGRT-SNQYHVYFQSSDEKLAYPVDRLRVHQEWKNGMW 209
           V  +DN+GWW+G++ G+  +  Y+VYF +++E++AY V  +RVH EW +G W
Sbjct: 87  VDAFDNDGWWLGQVTGKKDAEHYYVYFSTTNEEIAYHVSAIRVHHEWSHGEW 138


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