BLASTX nr result

ID: Coptis25_contig00030868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030868
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465941.1| hypothetical protein SORBIDRAFT_01g048600 [S...    66   3e-09
ref|NP_001237566.1| uncharacterized protein LOC100306614 [Glycin...    66   4e-09
tpg|DAA43111.1| TPA: hypothetical protein ZEAMMB73_115308, parti...    65   7e-09
ref|NP_001143490.1| uncharacterized protein LOC100276168 [Zea ma...    65   7e-09
dbj|BAJ98526.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   1e-08

>ref|XP_002465941.1| hypothetical protein SORBIDRAFT_01g048600 [Sorghum bicolor]
           gi|241919795|gb|EER92939.1| hypothetical protein
           SORBIDRAFT_01g048600 [Sorghum bicolor]
          Length = 132

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
 Frame = +2

Query: 242 IVFASPNNKEGDIIQGKSEGSESDTTR----GPPLLTILAGVIVFFLVIWIIGSIVTWLV 409
           I F   +NK+     G+   S  D +     GPP+LTI+AGV+VF LV+W+IGSIVTW+V
Sbjct: 64  ISFGKEHNKQALFASGRDSPSSGDDSSSSPDGPPVLTIVAGVVVFLLVLWVIGSIVTWIV 123

Query: 410 GLV 418
           GLV
Sbjct: 124 GLV 126


>ref|NP_001237566.1| uncharacterized protein LOC100306614 [Glycine max]
           gi|255629079|gb|ACU14884.1| unknown [Glycine max]
          Length = 123

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
 Frame = +2

Query: 128 PKLTLITP-------ISTLKFRYANISNFRSGDVGHLVNSKEIPHIVFASPNNK-EGDII 283
           P LTL  P       I+  KF  ++ S  R      L+ ++ +  +   +PN+  E    
Sbjct: 13  PHLTLGFPSPPQFLSIAAPKFSPSS-STIRCKGFSRLIVNQRLVTVFATNPNSVGEKSPT 71

Query: 284 QGKSEGSESDTTRGPPLLTILAGVIVFFLVIWIIGSIVTWLVGLVVNVPTLK 439
           +G      S+  +GPPLLTILAG  V F+V W I SI+TWL+ L+VNVP  K
Sbjct: 72  EGSDVNETSNAAQGPPLLTILAGFFVLFVVCWSIWSIITWLISLIVNVPAPK 123


>tpg|DAA43111.1| TPA: hypothetical protein ZEAMMB73_115308, partial [Zea mays]
          Length = 104

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
 Frame = +2

Query: 242 IVFASPNNKEGDIIQGKSEGSESD----TTRGPPLLTILAGVIVFFLVIWIIGSIVTWLV 409
           I F   +N++     G+   S SD    +  GPP+LTILAGV VF LV+W++GS+VTW+V
Sbjct: 36  ISFGKEHNRQALFASGRGSPSSSDDGSSSPDGPPVLTILAGVTVFLLVLWVVGSVVTWIV 95

Query: 410 GLV 418
           GLV
Sbjct: 96  GLV 98


>ref|NP_001143490.1| uncharacterized protein LOC100276168 [Zea mays]
           gi|195621424|gb|ACG32542.1| hypothetical protein [Zea
           mays]
          Length = 134

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
 Frame = +2

Query: 242 IVFASPNNKEGDIIQGKSEGSESD----TTRGPPLLTILAGVIVFFLVIWIIGSIVTWLV 409
           I F   +N++     G+   S SD    +  GPP+LTILAGV VF LV+W++GS+VTW+V
Sbjct: 66  ISFGKEHNRQALFASGRGSPSSSDDGSSSPDGPPVLTILAGVTVFLLVLWVVGSVVTWIV 125

Query: 410 GLV 418
           GLV
Sbjct: 126 GLV 128


>dbj|BAJ98526.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 134

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/59 (50%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = +2

Query: 245 VFASPNNKEGDIIQGKSEGSESDTTR-GPPLLTILAGVIVFFLVIWIIGSIVTWLVGLV 418
           +FAS  +     I  +S  S+++++  GPP+LTILAG++VFFL++W+IGSI TW+VGLV
Sbjct: 70  LFASETDSPNTEISKQSSTSDANSSPDGPPVLTILAGIVVFFLLLWVIGSIFTWIVGLV 128


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