BLASTX nr result

ID: Coptis25_contig00030849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030849
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana]                        86   2e-15
ref|NP_171934.1| BTB/POZ domain-containing protein [Arabidopsis ...    86   2e-15
sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing ...    86   2e-15
ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]...    86   4e-15
ref|XP_002437439.1| hypothetical protein SORBIDRAFT_10g027080 [S...    84   2e-14

>gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana]
          Length = 979

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/104 (42%), Positives = 64/104 (61%)
 Frame = +1

Query: 52  AKNRSSTPSKQMITHHQRLYQALNLGITKCHYNEGRKWQSMDIEIQRLAIRSISAFIACI 231
           A ++    +  + T H RLY ALNLG   C   E +KW+  DIEIQR  ++SISAF+ C 
Sbjct: 2   ASSKGGNTTAHINTLHHRLYHALNLGFRVCDEKE-KKWKCTDIEIQRHVVKSISAFLDCF 60

Query: 232 SSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFV 363
           S  T  + L+KDSI+DI  AL+ I  ++N A++G+ A V +  +
Sbjct: 61  SRATANNRLIKDSISDIAGALVFILGSKNRAVVGLAANVVIRLI 104


>ref|NP_171934.1| BTB/POZ domain-containing protein [Arabidopsis thaliana]
           gi|332189570|gb|AEE27691.1| BTB/POZ domain-containing
           protein [Arabidopsis thaliana]
          Length = 849

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/104 (42%), Positives = 64/104 (61%)
 Frame = +1

Query: 52  AKNRSSTPSKQMITHHQRLYQALNLGITKCHYNEGRKWQSMDIEIQRLAIRSISAFIACI 231
           A ++    +  + T H RLY ALNLG   C   E +KW+  DIEIQR  ++SISAF+ C 
Sbjct: 2   ASSKGGNTTAHINTLHHRLYHALNLGFRVCDEKE-KKWKCTDIEIQRHVVKSISAFLDCF 60

Query: 232 SSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFV 363
           S  T  + L+KDSI+DI  AL+ I  ++N A++G+ A V +  +
Sbjct: 61  SRATANNRLIKDSISDIAGALVFILGSKNRAVVGLAANVVIRLI 104


>sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing protein At1g04390
          Length = 1002

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/104 (42%), Positives = 64/104 (61%)
 Frame = +1

Query: 52  AKNRSSTPSKQMITHHQRLYQALNLGITKCHYNEGRKWQSMDIEIQRLAIRSISAFIACI 231
           A ++    +  + T H RLY ALNLG   C   E +KW+  DIEIQR  ++SISAF+ C 
Sbjct: 2   ASSKGGNTTAHINTLHHRLYHALNLGFRVCDEKE-KKWKCTDIEIQRHVVKSISAFLDCF 60

Query: 232 SSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFV 363
           S  T  + L+KDSI+DI  AL+ I  ++N A++G+ A V +  +
Sbjct: 61  SRATANNRLIKDSISDIAGALVFILGSKNRAVVGLAANVVIRLI 104


>ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]
           gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 978

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = +1

Query: 52  AKNRSSTPSKQMITHHQRLYQALNLGITKCHYNEGRKWQSMDIEIQRLAIRSISAFIACI 231
           A ++    +  + T H RLY ALNLG   C   E +KW+  DIEIQR  ++SISAF+ C 
Sbjct: 2   ASSKGGNTTAHINTLHHRLYHALNLGFRVCDEKE-KKWKCTDIEIQRHVVKSISAFLDCF 60

Query: 232 SSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFV 363
           S  T  + L+KDSI+DI  AL+ I   +N A++G+ A V +  +
Sbjct: 61  SRATANNRLIKDSISDIAGALVFILGCKNRAVVGLAANVVIRLI 104


>ref|XP_002437439.1| hypothetical protein SORBIDRAFT_10g027080 [Sorghum bicolor]
           gi|241915662|gb|EER88806.1| hypothetical protein
           SORBIDRAFT_10g027080 [Sorghum bicolor]
          Length = 438

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/107 (39%), Positives = 68/107 (63%)
 Frame = +1

Query: 43  RKSAKNRSSTPSKQMITHHQRLYQALNLGITKCHYNEGRKWQSMDIEIQRLAIRSISAFI 222
           RK+A       + Q +    RL+ AL LG+TK      +KWQS D  +Q   ++S+ AF+
Sbjct: 20  RKAASAAEQLLTGQALPQRTRLHDALALGLTKSDGQGAKKWQSSDAGVQSHVLKSVGAFV 79

Query: 223 ACISSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFV 363
            C+S++ L+ S++K+SI+DI++AL GI KT+N ++L   A+V+  FV
Sbjct: 80  GCLSNELLKLSVIKESISDILVALEGILKTKNVSVLIQAADVSSKFV 126


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