BLASTX nr result
ID: Coptis25_contig00030847
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030847 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family prote... 76 3e-12 ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab... 76 3e-12 ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|22354... 76 3e-12 ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] g... 76 3e-12 ref|XP_003536156.1| PREDICTED: protein pelota-like [Glycine max] 73 3e-11 >ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis thaliana] gi|3941543|gb|AAC82379.1| pelota [Arabidopsis thaliana] gi|4469016|emb|CAB38277.1| pelota (PEL1) [Arabidopsis thaliana] gi|7269619|emb|CAB81415.1| pelota (PEL1) [Arabidopsis thaliana] gi|18377690|gb|AAL66995.1| putative pelota (PEL1) protein [Arabidopsis thaliana] gi|20465995|gb|AAM20219.1| putative pelota protein (PEL1) [Arabidopsis thaliana] gi|332659974|gb|AEE85374.1| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis thaliana] Length = 378 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/44 (84%), Positives = 40/44 (90%) Frame = -1 Query: 391 SVKDIGGSALIFSSMHVSGEQLATLTGIAAILRFPLPELDDIEM 260 SVKD GG A IFS+MHVSGEQLA LTGIAA+LRFPLPEL+DIEM Sbjct: 335 SVKDSGGDAFIFSAMHVSGEQLAQLTGIAALLRFPLPELEDIEM 378 >ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata] Length = 378 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/44 (84%), Positives = 40/44 (90%) Frame = -1 Query: 391 SVKDIGGSALIFSSMHVSGEQLATLTGIAAILRFPLPELDDIEM 260 SVKD GG A IFS+MHVSGEQLA LTGIAA+LRFPLPEL+DIEM Sbjct: 335 SVKDSGGEAFIFSAMHVSGEQLAQLTGIAALLRFPLPELEDIEM 378 >ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|223548575|gb|EEF50066.1| pelota, putative [Ricinus communis] Length = 378 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/44 (86%), Positives = 41/44 (93%) Frame = -1 Query: 391 SVKDIGGSALIFSSMHVSGEQLATLTGIAAILRFPLPELDDIEM 260 SVKD GG+A IFSSMHVSGEQLA LTGIAAILRFPLP+L+DIEM Sbjct: 335 SVKDSGGNAHIFSSMHVSGEQLAQLTGIAAILRFPLPDLEDIEM 378 >ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] gi|297735305|emb|CBI17667.3| unnamed protein product [Vitis vinifera] Length = 378 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/44 (86%), Positives = 41/44 (93%) Frame = -1 Query: 391 SVKDIGGSALIFSSMHVSGEQLATLTGIAAILRFPLPELDDIEM 260 SVKD GG+A IFSSMHVSGEQLA LTGIAAILRFPLP+L+DIEM Sbjct: 335 SVKDSGGTAHIFSSMHVSGEQLAQLTGIAAILRFPLPDLEDIEM 378 >ref|XP_003536156.1| PREDICTED: protein pelota-like [Glycine max] Length = 379 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/44 (79%), Positives = 40/44 (90%) Frame = -1 Query: 391 SVKDIGGSALIFSSMHVSGEQLATLTGIAAILRFPLPELDDIEM 260 SVKD GGS +FSSMHVSGEQLA ++GIAAILRFPLP+L+DIEM Sbjct: 336 SVKDSGGSVHVFSSMHVSGEQLAQISGIAAILRFPLPDLEDIEM 379