BLASTX nr result
ID: Coptis25_contig00030837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00030837
(660 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat rece... 129 6e-28
ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|2... 121 1e-25
ref|XP_002888661.1| At1g68400/T2E12_5 [Arabidopsis lyrata subsp.... 119 7e-25
ref|NP_177007.1| leucine-rich repeat transmembrane protein kinas... 117 2e-24
gb|AAK55693.1|AF378890_1 At1g68400/T2E12_5 [Arabidopsis thaliana... 117 2e-24
>ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat receptor-like protein
kinase At1g68400-like [Vitis vinifera]
Length = 608
Score = 129 bits (323), Expect = 6e-28
Identities = 80/176 (45%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +1
Query: 139 KASSDHYNSLSSWSNSTHFC--SWLGVTCNSNITRVTQLVLQNLNLTGSVXXXXXXXXXX 312
K+SSDH+NSLSSWSNSTH C SWLGVTCN+ +VT LVL LNLTGS
Sbjct: 32 KSSSDHFNSLSSWSNSTHPCSGSWLGVTCNNG--QVTHLVLDRLNLTGSTRALSRLPQLR 89
Query: 313 XXXXKHXXXXXXXXXXXXXXXXXKLLYLSHNQFSGNFPSGVIQLLRLRRIDLSHNQFFGE 492
H K LYLS N+FSG FP+GV + R+RR+ LSHN F GE
Sbjct: 90 LLSLNH--NRLSSVVNLSSWPNLKHLYLSDNRFSGEFPAGVSSIRRIRRLVLSHNNFSGE 147
Query: 493 IXXXXXXXXXXXXXXXXESNYFNGSLQTD-TLKALEGFNVSDNNLSGEIPRPLSLF 657
I E N F G+L ++ + ++ FNVS NNL+GEIP LS F
Sbjct: 148 IPMNKLTQLRHLLTLRLEENSFTGTLSSNSSSSSIYDFNVSGNNLAGEIPAWLSQF 203
>ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|222855476|gb|EEE93023.1|
predicted protein [Populus trichocarpa]
Length = 651
Score = 121 bits (304), Expect = 1e-25
Identities = 74/174 (42%), Positives = 92/174 (52%), Gaps = 5/174 (2%)
Frame = +1
Query: 151 DHYNSLSSWSNSTHFC--SWLGVTCNSNITRVTQLVLQNLNLTGSVXXXXXXXXXXXXXX 324
D N+LS+W NST+ C SWLGVTC+ RVT+LVL+NLNLTGS+
Sbjct: 39 DSSNALSTWVNSTNPCIDSWLGVTCHPTTHRVTKLVLENLNLTGSIDALSQLTQLRLLSL 98
Query: 325 KHXXXXXXXXXXXXXXXXXKLLYLSHNQFSGNFPSGVIQLLRLRRIDLSHNQFFGEIXXX 504
K KLLYLSHN+ SGNFPSG+ L RLRR+DLS+N F+GEI
Sbjct: 99 KQNHLSSAFDLNFSSLKNLKLLYLSHNRLSGNFPSGIHSLRRLRRLDLSYNYFYGEIPFP 158
Query: 505 XXXXXXXXXXXXXESNYFNGSLQTDTL---KALEGFNVSDNNLSGEIPRPLSLF 657
+ N F G + + ++ FNVS+N LSGEIP S F
Sbjct: 159 ELAQMPRLLTLRLDFNSFTGKIGPFSFFPSGSILEFNVSNNFLSGEIPAIFSRF 212
>ref|XP_002888661.1| At1g68400/T2E12_5 [Arabidopsis lyrata subsp. lyrata]
gi|297334502|gb|EFH64920.1| At1g68400/T2E12_5
[Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 119 bits (297), Expect = 7e-25
Identities = 70/173 (40%), Positives = 91/173 (52%)
Frame = +1
Query: 139 KASSDHYNSLSSWSNSTHFCSWLGVTCNSNITRVTQLVLQNLNLTGSVXXXXXXXXXXXX 318
K ++D L+SW+ +T+ C W GV+CN N RVT+LVL+++ LTGS+
Sbjct: 37 KLTADSTGKLNSWNKTTNPCQWTGVSCNRN--RVTRLVLEDIELTGSISPLTSLTSLRVL 94
Query: 319 XXKHXXXXXXXXXXXXXXXXXKLLYLSHNQFSGNFPSGVIQLLRLRRIDLSHNQFFGEIX 498
KH KLL+LSHNQFSGNFPS + L RL R+DLS N F GEI
Sbjct: 95 SLKHNSLSGPIPNLSNLTAL-KLLFLSHNQFSGNFPSSITSLTRLYRLDLSFNNFSGEI- 152
Query: 499 XXXXXXXXXXXXXXXESNYFNGSLQTDTLKALEGFNVSDNNLSGEIPRPLSLF 657
ESN F+G + + L+ FNVS NN +G+IP LS F
Sbjct: 153 PPDLTNLNHLLTLRLESNRFSGQIPNIIISDLQDFNVSGNNFNGQIPNSLSQF 205
>ref|NP_177007.1| leucine-rich repeat transmembrane protein kinase family protein
[Arabidopsis thaliana]
gi|75336092|sp|Q9M9C5.1|Y1680_ARATH RecName:
Full=Probable leucine-rich repeat receptor-like protein
kinase At1g68400; Flags: Precursor
gi|6714351|gb|AAF26042.1|AC015986_5 putative receptor
kinase; 18202-20717 [Arabidopsis thaliana]
gi|224589469|gb|ACN59268.1| leucine-rich repeat
receptor-like protein kinase [Arabidopsis thaliana]
gi|332196668|gb|AEE34789.1| leucine-rich repeat
transmembrane protein kinase family protein [Arabidopsis
thaliana]
Length = 670
Score = 117 bits (293), Expect = 2e-24
Identities = 69/173 (39%), Positives = 92/173 (53%)
Frame = +1
Query: 139 KASSDHYNSLSSWSNSTHFCSWLGVTCNSNITRVTQLVLQNLNLTGSVXXXXXXXXXXXX 318
K ++D L+SW+ +T+ C W GV+CN N RVT+LVL+++NLTGS+
Sbjct: 39 KLTADSTGKLNSWNTTTNPCQWTGVSCNRN--RVTRLVLEDINLTGSISSLTSLTSLRVL 96
Query: 319 XXKHXXXXXXXXXXXXXXXXXKLLYLSHNQFSGNFPSGVIQLLRLRRIDLSHNQFFGEIX 498
KH KLL+LS+NQFSGNFP+ + L RL R+DLS N F G+I
Sbjct: 97 SLKHNNLSGPIPNLSNLTAL-KLLFLSNNQFSGNFPTSITSLTRLYRLDLSFNNFSGQI- 154
Query: 499 XXXXXXXXXXXXXXXESNYFNGSLQTDTLKALEGFNVSDNNLSGEIPRPLSLF 657
ESN F+G + L L+ FNVS NN +G+IP LS F
Sbjct: 155 PPDLTDLTHLLTLRLESNRFSGQIPNINLSDLQDFNVSGNNFNGQIPNSLSQF 207
>gb|AAK55693.1|AF378890_1 At1g68400/T2E12_5 [Arabidopsis thaliana] gi|20857353|gb|AAM26714.1|
At1g68400/T2E12_5 [Arabidopsis thaliana]
Length = 671
Score = 117 bits (293), Expect = 2e-24
Identities = 69/173 (39%), Positives = 92/173 (53%)
Frame = +1
Query: 139 KASSDHYNSLSSWSNSTHFCSWLGVTCNSNITRVTQLVLQNLNLTGSVXXXXXXXXXXXX 318
K ++D L+SW+ +T+ C W GV+CN N RVT+LVL+++NLTGS+
Sbjct: 39 KLTADSTGKLNSWNTTTNPCQWTGVSCNRN--RVTRLVLEDINLTGSISSLTSLTSLRVL 96
Query: 319 XXKHXXXXXXXXXXXXXXXXXKLLYLSHNQFSGNFPSGVIQLLRLRRIDLSHNQFFGEIX 498
KH KLL+LS+NQFSGNFP+ + L RL R+DLS N F G+I
Sbjct: 97 SLKHNNLSGPIPNLSNLTAL-KLLFLSNNQFSGNFPTSITSLTRLYRLDLSFNNFSGQI- 154
Query: 499 XXXXXXXXXXXXXXXESNYFNGSLQTDTLKALEGFNVSDNNLSGEIPRPLSLF 657
ESN F+G + L L+ FNVS NN +G+IP LS F
Sbjct: 155 PPDLTDLTHLLTLRLESNRFSGQIPNINLSDLQDFNVSGNNFNGQIPNSLSQF 207