BLASTX nr result
ID: Coptis25_contig00030819
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030819 (483 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 86 3e-15 emb|CBI28007.3| unnamed protein product [Vitis vinifera] 86 3e-15 ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 84 9e-15 ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c... 84 1e-14 ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2... 82 4e-14 >ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera] Length = 102 Score = 85.9 bits (211), Expect = 3e-15 Identities = 44/104 (42%), Positives = 61/104 (58%) Frame = +1 Query: 4 TPEVLKQFTRHPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCM 183 +PE RH ID CFDLDLA+T +S ++K V+ +PTV+++ C Sbjct: 5 SPESSLMVNRH-------IDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CT 55 Query: 184 ICMEEFNRGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 315 +C E F G+ K+L C H YH C+++WLS NSCPLCRCS+ Sbjct: 56 VCREGFQSGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 98 >emb|CBI28007.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 85.9 bits (211), Expect = 3e-15 Identities = 44/104 (42%), Positives = 61/104 (58%) Frame = +1 Query: 4 TPEVLKQFTRHPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCM 183 +PE RH ID CFDLDLA+T +S ++K V+ +PTV+++ C Sbjct: 71 SPESSLMVNRH-------IDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CT 121 Query: 184 ICMEEFNRGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 315 +C E F G+ K+L C H YH C+++WLS NSCPLCRCS+ Sbjct: 122 VCREGFQSGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 164 >ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] Length = 116 Score = 84.3 bits (207), Expect = 9e-15 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 3/97 (3%) Frame = +1 Query: 34 HPAMSTFSIDSCFDLDLALTTP---VQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 204 + A I+S FDLD LT V P VAELPTV++ VC +CME+F Sbjct: 7 YAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFL 66 Query: 205 RGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 315 + K++ C HVYH++C+S+WLS +SCPLCRC I Sbjct: 67 PDEG-GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 102 >ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis] gi|223546684|gb|EEF48182.1| hypothetical protein RCOM_1049910 [Ricinus communis] Length = 109 Score = 84.0 bits (206), Expect = 1e-14 Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +1 Query: 46 STFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGG--VCMICMEEFNRGKDV 219 ST ID FD+D AL P E D VA++PTV+S VC ICME F Sbjct: 13 STCLIDVSFDMDEALALPPNFGHQISESDSLVADMPTVTSTDDHDVCSICMEGFQSPGVC 72 Query: 220 AKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 315 K++ C HVYH C+S+WLS NSCPLCR +I Sbjct: 73 GKQVPCGHVYHAPCISSWLSNCNSCPLCRFNI 104 >ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1| predicted protein [Populus trichocarpa] Length = 99 Score = 82.0 bits (201), Expect = 4e-14 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = +1 Query: 46 STFSIDSCFDLDLALTTPVQ-SSLVTKEPDFRVAELPTVSSIG-GVCMICMEEFNRGKDV 219 S+ ID+ FDLD ALT P S +T VA++PT + G VC +CME F G Sbjct: 7 SSCLIDTSFDLDEALTLPQNLSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIG- 65 Query: 220 AKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 315 K++ C HVYHE C+S LS +SCPLCRC I Sbjct: 66 GKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97