BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030792
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   101   7e-20
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat...   101   7e-20
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19

>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +1

Query: 1   LAFALISRPHSVTAIRILKNIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSC 180
           LAF LI +P+ ++ IRI+KNIR+C DCH FMKF S+ IGR+IILRDSN FHHF  G+CSC
Sbjct: 632 LAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSC 691

Query: 181 NDYW 192
           ND W
Sbjct: 692 NDNW 695


>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +1

Query: 1   LAFALISRPHSVTAIRILKNIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSC 180
           LAF LI +P+ ++ IRI+KNIR+C DCH FMKF S+ IGR+IILRDSN FHHF  G+CSC
Sbjct: 632 LAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSC 691

Query: 181 NDYW 192
           ND W
Sbjct: 692 NDNW 695


>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = +1

Query: 1   LAFALISRPHSVTAIRILKNIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSC 180
           LAFALI +P+ V  IRI+KNIRVC DCH+FMKF S +I R II+RDSN FHHF GG+CSC
Sbjct: 630 LAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSC 689

Query: 181 NDYW 192
           ND W
Sbjct: 690 NDNW 693


>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +1

Query: 1   LAFALISRPHSVTAIRILKNIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSC 180
           LA+ LI +PH VT IRI+KNIR C DCH+FMKFVS    R +ILRDSN FHHF  G+CSC
Sbjct: 632 LAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSC 691

Query: 181 NDYW 192
            DYW
Sbjct: 692 KDYW 695


>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
           gi|297738773|emb|CBI28018.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = +1

Query: 1   LAFALISRPHSVTAIRILKNIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSC 180
           LAF LI +PH  T IRI+KNIRVCGDCH+FMKFVSK I R IILRD N FHHF  G+CSC
Sbjct: 632 LAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSC 691

Query: 181 NDYW 192
            D W
Sbjct: 692 KDSW 695