BLASTX nr result

ID: Coptis25_contig00030783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030783
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...   183   2e-44
ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002523387.1| conserved hypothetical protein [Ricinus comm...   148   8e-34
ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp....   127   1e-27
emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|72694...   125   7e-27

>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score =  183 bits (465), Expect = 2e-44
 Identities = 108/200 (54%), Positives = 129/200 (64%), Gaps = 8/200 (4%)
 Frame = +2

Query: 71  ARKAKLNEYEEIRRRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFRNITPVIGG 250
           ARKAKL EY E++RRMSCV NSD+LRSARNALNQYPRFSLDGKDAMYRSSFRN+ P    
Sbjct: 119 ARKAKLQEYGEMQRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRNLAP---- 174

Query: 251 GYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLN--LPHTIGGKSVIWCKPSVVATLMGL 424
               GRKS+CC  GL             +EK  +  LP T+ G+SVIWCKP VVA LMGL
Sbjct: 175 ----GRKSICCNRGLVRGRCYTDEFDSKLEKKTSSCLPSTLAGESVIWCKPGVVAKLMGL 230

Query: 425 EAMPIPITRKLGKGRLSCKVKSQNL-RRAERHEMEKQRGFTRGMNG---WKEIGTEARRS 592
           E MP+P++      +L+  V  QNL RRA+RHEME++R F   MNG    +  GT A  S
Sbjct: 231 EVMPVPVSCNRSTEKLNSIVNRQNLRRRAQRHEMERRR-FVMDMNGCGATQRQGTMA--S 287

Query: 593 FSTTNSTCVTK--AIPPVEL 646
            S T   CV +  A+ P  +
Sbjct: 288 CSKTGRYCVMRPLAVEPANI 307


>ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|222844868|gb|EEE82415.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  173 bits (439), Expect = 2e-41
 Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 5/192 (2%)
 Frame = +2

Query: 71  ARKAKLNEYEEI---RRRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFRNITPV 241
           ARKAKLN Y ++     RMSCV NSD+LRSARNAL+QYPRFSLDGKDAMYRSSFRN+  V
Sbjct: 69  ARKAKLNNYVDVGLRAGRMSCVNNSDILRSARNALSQYPRFSLDGKDAMYRSSFRNLDSV 128

Query: 242 IGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVATLMG 421
                  GRKSVCC  GL ER+          E+ L+LP T+ G+ V+WCKP VVA LMG
Sbjct: 129 SKAA--AGRKSVCCDHGLRERM-NRNNLGAKFERKLSLPPTLAGERVVWCKPGVVAKLMG 185

Query: 422 LEAMPIPITRKLGKGRLSCKVKSQNL-RRAERHEMEKQ-RGFTRGMNGWKEIGTEARRSF 595
           LEAMP+PI  +  K  L+  +K QNL RRAERHE+E++  G     +G K  G  +  S 
Sbjct: 186 LEAMPVPINSREDKETLASIIKRQNLRRRAERHEIERRLAGDVSAFDGIKR-GRSSMPSC 244

Query: 596 STTNSTCVTKAI 631
           S     CVTK +
Sbjct: 245 SKP-GYCVTKPV 255


>ref|XP_002523387.1| conserved hypothetical protein [Ricinus communis]
           gi|223537337|gb|EEF38966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  148 bits (374), Expect = 8e-34
 Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 4/158 (2%)
 Frame = +2

Query: 71  ARKAKLNEYEEIR-RRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFRNITPVIG 247
           +RK+KLNE   +R RRMSCV NSD+LRSARNALNQYPRFSLDGKDAMYRSSFRN    + 
Sbjct: 79  SRKSKLNELVAMRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRN----LD 134

Query: 248 GGYKDGRKSVCC--GSGLTERIXXXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVATLMG 421
                GRKSVCC  G G+  R            +N  LP ++ G++V+WCKP V+  LMG
Sbjct: 135 HHQVAGRKSVCCCDGRGVLMR---ERNDGFLDRRNSCLPTSLRGENVVWCKPGVIGKLMG 191

Query: 422 LEAMPIPITRKLGKGRLSCKVKSQNL-RRAERHEMEKQ 532
           L+AMP+P+  +  K  +S  +K Q+L RR ERHEME++
Sbjct: 192 LDAMPVPVHNR--KETISPIIKRQSLRRRVERHEMERR 227


>ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313401|gb|EFH43824.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 647

 Score =  127 bits (320), Expect = 1e-27
 Identities = 78/168 (46%), Positives = 96/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 113 RMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSF-RNITPVIGGGYKDGRKSVCCGS 289
           RMSCV +SD+LRSARNALNQYPRFSLDGKDAMYRSSF R +        + GR+S C   
Sbjct: 474 RMSCVNSSDILRSARNALNQYPRFSLDGKDAMYRSSFRRQLGTSADMTIQGGRRSHCGDQ 533

Query: 290 GLTERIXXXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVATLMGLEAMPIPITRKLGKGR 469
             ++R            +   LP T+ G+SV+WCK  VVA LMGLE +P+P+  K GK +
Sbjct: 534 RTSKRSSQMSL------ETKRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPVKGKTGKDK 587

Query: 470 LSCKVKSQNLRRAERHEMEKQRGFTRGMNGWKEIGTEARRSFSTTNST 613
           L   +K + LRR ER         T  +NG     TEA  S    N T
Sbjct: 588 LGTLLKRERLRRRER---------TLDINGRTGPTTEASCSSGGFNIT 626


>emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|7269494|emb|CAB79497.1|
           putative protein [Arabidopsis thaliana]
          Length = 619

 Score =  125 bits (314), Expect = 7e-27
 Identities = 78/168 (46%), Positives = 96/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 113 RMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSF-RNITPVIGGGYKDGRKSVCCGS 289
           RMSCV +SD+LRSARNALNQYPRFSLDGKDAMYRSSF R++        + GR+S C   
Sbjct: 446 RMSCVNSSDILRSARNALNQYPRFSLDGKDAMYRSSFRRHLGTSADMTIQGGRRSHCGDQ 505

Query: 290 GLTERIXXXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVATLMGLEAMPIPITRKLGKGR 469
             ++R            +   LP T+ G+SV+WCK  VVA LMGLE +P+P   K GK +
Sbjct: 506 RTSKRSSQMSL------ETKRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPDKGKSGKDK 559

Query: 470 LSCKVKSQNLRRAERHEMEKQRGFTRGMNGWKEIGTEARRSFSTTNST 613
           L   +K + LRR ER         T  +NG     TEA  S    N T
Sbjct: 560 LGTLLKRERLRRRER---------TLDVNGRTGPTTEASCSSGGFNIT 598


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