BLASTX nr result

ID: Coptis25_contig00030775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030775
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...   102   3e-20
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
gb|ADE76082.1| unknown [Picea sitchensis]                              91   1e-16
dbj|BAK04113.1| predicted protein [Hordeum vulgare subsp. vulgare]     89   3e-16
ref|XP_002454925.1| hypothetical protein SORBIDRAFT_03g001480 [S...    89   4e-16

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
           gi|302143706|emb|CBI22567.3| unnamed protein product
           [Vitis vinifera]
          Length = 673

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/93 (49%), Positives = 67/93 (72%)
 Frame = +3

Query: 6   RAVCALYQQHKRQEKRMGQSLHFTSRGFSKSDERRITRLATFLLEGSEKGEVKKNISDLE 185
           +AVCALY+Q   +EK + ++++   RGFS+ D  R T LA +L +G  +G++KK++ DL+
Sbjct: 578 KAVCALYRQQTSEEKTVKETIYSNQRGFSQCDALRGTTLAEYLTDGDPQGDLKKSVKDLQ 637

Query: 186 RYEPRGLEECKRLARSHYKQLFTIYQNKEDPFF 284
           +Y P+ LE C+ LA  + KQLF IYQNKEDPFF
Sbjct: 638 QYHPKALELCRTLATHYSKQLFAIYQNKEDPFF 670


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/93 (47%), Positives = 65/93 (69%)
 Frame = +3

Query: 6   RAVCALYQQHKRQEKRMGQSLHFTSRGFSKSDERRITRLATFLLEGSEKGEVKKNISDLE 185
           +AVCALY+Q   +EK   ++LH   RGFSK D  R ++LA FL++G   G++KK++ +L+
Sbjct: 480 KAVCALYRQQSDEEKLNKETLHGNGRGFSKFDAPRGSKLAEFLIDGDPSGDLKKSVLELQ 539

Query: 186 RYEPRGLEECKRLARSHYKQLFTIYQNKEDPFF 284
            Y  +G+  C++LA  + KQLF IY+NKEDP F
Sbjct: 540 AYNSKGVTLCRKLATHYSKQLFQIYKNKEDPLF 572


>gb|ADE76082.1| unknown [Picea sitchensis]
          Length = 125

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 60/94 (63%)
 Frame = +3

Query: 6   RAVCALYQQHKRQEKRMGQSLHFTSRGFSKSDERRITRLATFLLEGSEKGEVKKNISDLE 185
           RA+CALY+Q   +EKR   SL+   RGF K    R + LA FL E    G +KK++ DLE
Sbjct: 30  RAICALYRQQTNEEKRGKSSLYQNRRGFDKLHALRGSLLAEFLTENDPFGPMKKSVQDLE 89

Query: 186 RYEPRGLEECKRLARSHYKQLFTIYQNKEDPFFP 287
           ++  +G++ C+ LA  H KQLF IY+N EDP FP
Sbjct: 90  KHNSKGVQYCRDLAIHHSKQLFEIYKNDEDPHFP 123


>dbj|BAK04113.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 464

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/94 (44%), Positives = 61/94 (64%)
 Frame = +3

Query: 6   RAVCALYQQHKRQEKRMGQSLHFTSRGFSKSDERRITRLATFLLEGSEKGEVKKNISDLE 185
           +AVCALY++   +E+    ++    +GFS+ D RR + +A FLL+G   G +KK   DLE
Sbjct: 371 KAVCALYRKQTEEEQAEKATILHNKKGFSQIDARRGSHIAQFLLDGDAAGPLKKTAQDLE 430

Query: 186 RYEPRGLEECKRLARSHYKQLFTIYQNKEDPFFP 287
           +Y+    E C ++A  + KQLF IYQNKEDP+FP
Sbjct: 431 KYDRYAPEFCHKMALRYSKQLFAIYQNKEDPYFP 464


>ref|XP_002454925.1| hypothetical protein SORBIDRAFT_03g001480 [Sorghum bicolor]
           gi|241926900|gb|EES00045.1| hypothetical protein
           SORBIDRAFT_03g001480 [Sorghum bicolor]
          Length = 691

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/93 (46%), Positives = 60/93 (64%)
 Frame = +3

Query: 6   RAVCALYQQHKRQEKRMGQSLHFTSRGFSKSDERRITRLATFLLEGSEKGEVKKNISDLE 185
           +AVCA+Y++    E+    SL    +GFS  D  R +R+A FLL+G   G VKK +SDL+
Sbjct: 597 KAVCAIYRKQTEDEQVEKASLVHNKQGFSHKDAPRGSRIAEFLLDGDRVGPVKKTVSDLD 656

Query: 186 RYEPRGLEECKRLARSHYKQLFTIYQNKEDPFF 284
            Y+    E C+++A  + KQLF IYQNKEDP+F
Sbjct: 657 DYDHYAFEFCRKVASHYSKQLFAIYQNKEDPYF 689


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