BLASTX nr result

ID: Coptis25_contig00030771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030771
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ...    68   1e-19
ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    60   6e-18
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    72   3e-16
ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...    55   6e-15
emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]    55   8e-15

>ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
           gi|355479784|gb|AES60987.1| hypothetical protein
           MTR_1g073220 [Medicago truncatula]
          Length = 361

 Score = 67.8 bits (164), Expect(2) = 1e-19
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = -3

Query: 542 FTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQS 363
           F     W+ L  +P  C T+ +G+K+  S       E+ E+  D    ++I+V + +   
Sbjct: 167 FRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVLASELYEYP-DKKLIIKIKVNLAVSTP 225

Query: 362 LRRGVTL-LIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESGGHPADPIGRHPYGP 186
           ++ G+ +        W+ +RYE LP FC+ CG +GH   +C+       A+   ++  GP
Sbjct: 226 IKAGIYIGSAKDGAHWIDFRYENLPQFCFACGLIGHTEANCKLHDTRTNAESRNKNVLGP 285

Query: 185 RLRYEGPIGKRV 150
            LRY    G+R+
Sbjct: 286 WLRY-NHFGRRI 296



 Score = 55.8 bits (133), Expect(2) = 1e-19
 Identities = 22/86 (25%), Positives = 43/86 (50%)
 Frame = -2

Query: 786 NSLLGKVFSDKVTNIGGFRKIMGKLWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGP 607
           NS+LGK+ S+K  +    +  +  +W      ++  + D++F F   +Q+  +R +   P
Sbjct: 84  NSILGKIVSEKAIHRNSIQNALSNIWCNPKGFRVEHIGDKLFHFFMDEQEDTKRIIRGNP 143

Query: 606 WSFGNNLLVLIPWTHGSIGITVYFNH 529
           W F N+ L++ PW       ++ F H
Sbjct: 144 WFFRNSWLIVHPWRRDIDARSLEFRH 169


>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
           gi|355478601|gb|AES59804.1| hypothetical protein
           MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 59.7 bits (143), Expect(2) = 6e-18
 Identities = 25/74 (33%), Positives = 46/74 (62%)
 Frame = -2

Query: 798 EFVGNSLLGKVFSDKVTNIGGFRKIMGKLWGCASSLKISKVSDQIFQFKFPDQQTLQRTL 619
           E  G +L+GK+++D   N+  F++ M + W   ++++I  ++  +F FKF  ++  +  L
Sbjct: 28  EAFGRTLVGKIWTDVPYNVRAFKQTMIQAWRLKNTVEIQDLNKNLFLFKFSSRRDAENIL 87

Query: 618 NTGPWSFGNNLLVL 577
            +GPWSF  NLL+L
Sbjct: 88  QSGPWSFDRNLLIL 101



 Score = 58.2 bits (139), Expect(2) = 6e-18
 Identities = 30/100 (30%), Positives = 52/100 (52%)
 Frame = -3

Query: 527 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQSLRRGV 348
           FW+ + ++PL      +  K+     K+ +++ R++   G   +RI+V +DL   L+RG 
Sbjct: 120 FWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDPRDNNRMGK-SIRIKVAIDLRNPLKRGT 178

Query: 347 TLLIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESG 228
            L                P+FCYKCG +GH +K C++E+G
Sbjct: 179 VL----------------PNFCYKCGRIGHQMKECEEETG 202


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
           gi|241919669|gb|EER92813.1| hypothetical protein
           SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 71.6 bits (174), Expect(2) = 3e-16
 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
 Frame = -3

Query: 563 MEVSASLFTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRV 384
           +  S  +F     W+ + N+PL  + +  G +V        K+++   G   G FLR RV
Sbjct: 138 LSASEIVFDRMDIWVRILNLPLGWMNQQRGARVMSLIGSVVKLDVDSDGKASGAFLRGRV 197

Query: 383 TVDLLQSLRRGVTLLIHGRDQ--WVPYRYERLPSFCYKCGHLGHILKHCQQESGGHPADP 210
           ++++ + LRRGV L +   ++  W   +YE+LP +C  CG LGH    C Q +  + A  
Sbjct: 198 SIEIDKPLRRGVLLRMSKSEEPKWFEAQYEKLPYYCSSCGMLGHSEIGCSQPAQRNEA-- 255

Query: 209 IGRHPYGPRLRYEGPIGKRVEVF 141
            G+ PY  +LR      +R + F
Sbjct: 256 -GKLPYDIQLRAPEEKKRRFQTF 277



 Score = 40.4 bits (93), Expect(2) = 3e-16
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -2

Query: 783 SLLGKVFSDKVTNIGGFRKIMGKLWGCASSLK---ISKVSDQIFQFKFPDQQTLQRTLNT 613
           +++GKV S    ++   R  M   WG    LK   I +  D +F  +F  +  L+R L+ 
Sbjct: 60  AVVGKVLSPMAVHVNTIRTAMKPAWGNPFGLKFRAIGEKGDNMFMAEFGTKADLERVLSG 119

Query: 612 GPWSFGNNLLVL 577
            PW  G + +VL
Sbjct: 120 TPWMVGKHAIVL 131


>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score = 54.7 bits (130), Expect(2) = 6e-15
 Identities = 25/86 (29%), Positives = 45/86 (52%)
 Frame = -2

Query: 780 LLGKVFSDKVTNIGGFRKIMGKLWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWS 601
           L+G+  +D++ N    +  +  +W     + I +++ Q+F F+F     L+R L  GPW+
Sbjct: 493 LIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWT 552

Query: 600 FGNNLLVLIPWTHGSIGITVYFNHFL 523
           F N+LL+L     G+I   +   H L
Sbjct: 553 FDNHLLILHHLKQGAIPTAIPLFHVL 578



 Score = 52.8 bits (125), Expect(2) = 6e-15
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
 Frame = -3

Query: 527 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGW--FLRIRVTVDLLQSLRR 354
           FW+ + +I +  ++  VG ++     K+    I  +   G W  F+RIRV +D+ Q L+ 
Sbjct: 579 FWIQVYDILVGSMSLNVGKQLDNFIGKFVDYNINNNA--GLWRNFMRIRVLLDVRQPLKM 636

Query: 353 GVTLLI-HGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQ 237
              +    G    V ++YERL +FCY CG LGH  K C +
Sbjct: 637 WKRIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCNK 676


>emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
          Length = 626

 Score = 55.1 bits (131), Expect(2) = 8e-15
 Identities = 25/86 (29%), Positives = 45/86 (52%)
 Frame = -2

Query: 780 LLGKVFSDKVTNIGGFRKIMGKLWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWS 601
           L+G+  +D++ N    +  +  +W     + I +++ Q+F F+F     L+R L  GPW+
Sbjct: 36  LIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFXFQFFHIVDLKRVLEGGPWT 95

Query: 600 FGNNLLVLIPWTHGSIGITVYFNHFL 523
           F N+LL+L     G+I   +   H L
Sbjct: 96  FDNHLLILHHLKQGAIPTAIPLFHVL 121



 Score = 52.0 bits (123), Expect(2) = 8e-15
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = -3

Query: 527 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGW--FLRIRVTVDLLQSLRR 354
           FW+ + +I +  ++  VG ++     K+    I  +   G W  F+RIRV +D  Q L+ 
Sbjct: 122 FWIQVYDILVGSMSLNVGKQLDNFIGKFVDYNINNNA--GLWRNFMRIRVLLDXRQPLKM 179

Query: 353 GVTLLI-HGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQ 237
              +    G    V ++YERL +FCY CG LGH  K C +
Sbjct: 180 WKRIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCDK 219


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