BLASTX nr result

ID: Coptis25_contig00030770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030770
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180749.2| myosin-like protein XIF [Arabidopsis thaliana] ...   158   4e-37
gb|AAD32282.1| putative unconventional myosin [Arabidopsis thali...   158   4e-37
ref|XP_002881204.1| hypothetical protein ARALYDRAFT_482115 [Arab...   158   5e-37
ref|XP_002512209.1| myosin XI, putative [Ricinus communis] gi|22...   155   4e-36
ref|XP_003559424.1| PREDICTED: myosin-Va-like [Brachypodium dist...   154   9e-36

>ref|NP_180749.2| myosin-like protein XIF [Arabidopsis thaliana]
           gi|330253507|gb|AEC08601.1| myosin-like protein XIF
           [Arabidopsis thaliana]
          Length = 1556

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/91 (84%), Positives = 86/91 (94%)
 Frame = -1

Query: 273 QDAIFRVVAAILHLGNINFVKGKDIDSSKLKDEKSLYHLQTASELLMCDEKDLEGSLCKR 94
           QDAIFRVVAAILHLGN+NF+KG++ DSSKL+D+KS YHLQTA+ELLMC+EK +E SLCKR
Sbjct: 316 QDAIFRVVAAILHLGNVNFIKGEEADSSKLRDDKSRYHLQTAAELLMCNEKMMEDSLCKR 375

Query: 93  VIVTPDGNITKPLDPASAASNRDALAKTVYS 1
           VIVTPDGNITKPLDP SAASNRDALAKTVYS
Sbjct: 376 VIVTPDGNITKPLDPESAASNRDALAKTVYS 406


>gb|AAD32282.1| putative unconventional myosin [Arabidopsis thaliana]
          Length = 1490

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/91 (84%), Positives = 86/91 (94%)
 Frame = -1

Query: 273 QDAIFRVVAAILHLGNINFVKGKDIDSSKLKDEKSLYHLQTASELLMCDEKDLEGSLCKR 94
           QDAIFRVVAAILHLGN+NF+KG++ DSSKL+D+KS YHLQTA+ELLMC+EK +E SLCKR
Sbjct: 250 QDAIFRVVAAILHLGNVNFIKGEEADSSKLRDDKSRYHLQTAAELLMCNEKMMEDSLCKR 309

Query: 93  VIVTPDGNITKPLDPASAASNRDALAKTVYS 1
           VIVTPDGNITKPLDP SAASNRDALAKTVYS
Sbjct: 310 VIVTPDGNITKPLDPESAASNRDALAKTVYS 340


>ref|XP_002881204.1| hypothetical protein ARALYDRAFT_482115 [Arabidopsis lyrata subsp.
           lyrata] gi|297327043|gb|EFH57463.1| hypothetical protein
           ARALYDRAFT_482115 [Arabidopsis lyrata subsp. lyrata]
          Length = 1557

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/91 (84%), Positives = 86/91 (94%)
 Frame = -1

Query: 273 QDAIFRVVAAILHLGNINFVKGKDIDSSKLKDEKSLYHLQTASELLMCDEKDLEGSLCKR 94
           QDAIFRVVAAILHLGN+NF+KG++ DSSKL+D+KS YHLQTA+ELLMC+EK +E SLCKR
Sbjct: 316 QDAIFRVVAAILHLGNVNFIKGEEADSSKLRDDKSRYHLQTAAELLMCNEKMMEDSLCKR 375

Query: 93  VIVTPDGNITKPLDPASAASNRDALAKTVYS 1
           VIVTPDGNITKPLDP SAASNRDALAKTVYS
Sbjct: 376 VIVTPDGNITKPLDPDSAASNRDALAKTVYS 406


>ref|XP_002512209.1| myosin XI, putative [Ricinus communis] gi|223548753|gb|EEF50243.1|
           myosin XI, putative [Ricinus communis]
          Length = 1529

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/91 (84%), Positives = 82/91 (90%)
 Frame = -1

Query: 273 QDAIFRVVAAILHLGNINFVKGKDIDSSKLKDEKSLYHLQTASELLMCDEKDLEGSLCKR 94
           QDAIFRVVAAILHLGN+ F+KGKD+DSSKLKDEKS YHLQTA+ELLMCDE  LE SLCKR
Sbjct: 295 QDAIFRVVAAILHLGNVEFIKGKDVDSSKLKDEKSRYHLQTAAELLMCDEIALESSLCKR 354

Query: 93  VIVTPDGNITKPLDPASAASNRDALAKTVYS 1
           VIVTPDGNITKPLDP  A  +RDALAKTVYS
Sbjct: 355 VIVTPDGNITKPLDPDLATLSRDALAKTVYS 385


>ref|XP_003559424.1| PREDICTED: myosin-Va-like [Brachypodium distachyon]
          Length = 1566

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = -1

Query: 273 QDAIFRVVAAILHLGNINFVKGKDIDSSKLKDEKSLYHLQTASELLMCDEKDLEGSLCKR 94
           QDAIFRVVAAILHLGNINF KG++IDSS+L+DEKS+YHL+T +ELLMCDEK LE SLCKR
Sbjct: 341 QDAIFRVVAAILHLGNINFSKGEEIDSSRLRDEKSVYHLKTVAELLMCDEKYLEDSLCKR 400

Query: 93  VIVTPDGNITKPLDPASAASNRDALAKTVYS 1
           VIVTPDGNITKPLDP SA  +RDALAKTVYS
Sbjct: 401 VIVTPDGNITKPLDPDSALQSRDALAKTVYS 431


Top