BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030759
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635216.1| PREDICTED: protein SCO1 homolog 2, mitochond...   314   2e-83
ref|XP_003531357.1| PREDICTED: protein SCO1 homolog 2, mitochond...   295   1e-77
ref|XP_003524268.1| PREDICTED: protein SCO1 homolog 2, mitochond...   281   2e-73
ref|XP_004143472.1| PREDICTED: protein SCO1 homolog 2, mitochond...   280   3e-73
ref|XP_002309982.1| predicted protein [Populus trichocarpa] gi|2...   279   7e-73

>ref|XP_003635216.1| PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Vitis
           vinifera] gi|296090611|emb|CBI40995.3| unnamed protein
           product [Vitis vinifera]
          Length = 270

 Score =  314 bits (805), Expect = 2e-83
 Identities = 159/243 (65%), Positives = 186/243 (76%), Gaps = 2/243 (0%)
 Frame = +1

Query: 37  RRFQCRGYCEAPKC-NRKITTQNVVPEKPSDVRSRSWSWVIVPA-GLLMIAGVGTVVHYN 210
           RRFQ R Y  +    N +      VP K     S+SWS  I+PA GLL IAG    +HYN
Sbjct: 27  RRFQSRSYSRSSWYGNGRPDIHTPVPVKTQG--SQSWSAFIIPAAGLLGIAGGALFIHYN 84

Query: 211 DERRAVPKGQGNERAKNTIYGPKFGGPFTLFDTEHHLVTERNLLGNWVLLYFGYTSSPDV 390
           DERR V KGQGN   +N + GP  GGPFTL D +H LVTE+NLLGNWVLLYFG TSSPDV
Sbjct: 85  DERRVVLKGQGNNSERNAVLGPIIGGPFTLIDAKHQLVTEQNLLGNWVLLYFGCTSSPDV 144

Query: 391 GPEEVQKMAKVIKTLDSKQNVNLIPIFVTLDPQRDSLSQLRAYLKEFDHRIVGLTGPITA 570
           GPE+VQ MAK I  L+SKQNV ++P+F+T+DPQRDS SQL+AYLKEFD RIVGLTGP  A
Sbjct: 145 GPEQVQMMAKAIDFLESKQNVRVLPVFITIDPQRDSPSQLQAYLKEFDSRIVGLTGPDAA 204

Query: 571 VRQMAQEYRVYFKKVEEDGSDYLIDSSHKMYLLQPNMEIVRCFGVEYGAEQLSEEILMEM 750
           +RQMAQEYRVYF+KVEEDG DYL++SSH MYL+ PNME+VRCFGVEY AE+LS+EIL E+
Sbjct: 205 IRQMAQEYRVYFRKVEEDGDDYLVESSHNMYLMNPNMEVVRCFGVEYNAEELSQEILKEV 264

Query: 751 SKS 759
            +S
Sbjct: 265 KRS 267


>ref|XP_003531357.1| PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Glycine max]
          Length = 275

 Score =  295 bits (755), Expect = 1e-77
 Identities = 137/209 (65%), Positives = 166/209 (79%)
 Frame = +1

Query: 133 SRSWSWVIVPAGLLMIAGVGTVVHYNDERRAVPKGQGNERAKNTIYGPKFGGPFTLFDTE 312
           SRSW   +VPA +L  AG+    HYNDERRAVPKG      +N   GP  GGPFTL +TE
Sbjct: 65  SRSWGAYVVPAAVLGFAGLAAFFHYNDERRAVPKGHQGGGLRNVANGPIIGGPFTLINTE 124

Query: 313 HHLVTERNLLGNWVLLYFGYTSSPDVGPEEVQKMAKVIKTLDSKQNVNLIPIFVTLDPQR 492
              +TERN LGNWVLLYFGYTSSPD+GPE+VQ MA  I  L+SKQN+ ++P+FV++DPQR
Sbjct: 125 KQAITERNFLGNWVLLYFGYTSSPDLGPEQVQIMANAIDILESKQNLKILPVFVSIDPQR 184

Query: 493 DSLSQLRAYLKEFDHRIVGLTGPITAVRQMAQEYRVYFKKVEEDGSDYLIDSSHKMYLLQ 672
           D+ SQLRAYLKEFD RI+GLTGP+ A+RQMAQEYRVYFKKVEEDG+DYL+D SH MYLL 
Sbjct: 185 DTPSQLRAYLKEFDSRIIGLTGPVAAIRQMAQEYRVYFKKVEEDGNDYLVDCSHNMYLLN 244

Query: 673 PNMEIVRCFGVEYGAEQLSEEILMEMSKS 759
           P +E+ RCFGVEY AE+LSE I+ E++++
Sbjct: 245 PKLEVTRCFGVEYSAEELSEAIVKELNRN 273


>ref|XP_003524268.1| PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Glycine max]
          Length = 241

 Score =  281 bits (718), Expect = 2e-73
 Identities = 134/202 (66%), Positives = 157/202 (77%)
 Frame = +1

Query: 154 IVPAGLLMIAGVGTVVHYNDERRAVPKGQGNERAKNTIYGPKFGGPFTLFDTEHHLVTER 333
           IVPA +L  AG+    HYNDERRAVPKG      +N   GP  GGPFTL +TE   +TE 
Sbjct: 38  IVPAAVLGFAGLAAFFHYNDERRAVPKGHQGGGLRNVANGPIIGGPFTLINTEKQAITEH 97

Query: 334 NLLGNWVLLYFGYTSSPDVGPEEVQKMAKVIKTLDSKQNVNLIPIFVTLDPQRDSLSQLR 513
           N LGNWVLLYFGYTSSPD GPE+VQ MAK I  L+SKQN+ ++P+FV+ DPQRD+ SQLR
Sbjct: 98  NFLGNWVLLYFGYTSSPDCGPEQVQIMAKAIDILESKQNLKILPVFVSTDPQRDTPSQLR 157

Query: 514 AYLKEFDHRIVGLTGPITAVRQMAQEYRVYFKKVEEDGSDYLIDSSHKMYLLQPNMEIVR 693
           AYLKEFD RI+GLTGP+ A+RQMAQEY  YFKKVEEDGSDYL+D SH MYLL P ME+ R
Sbjct: 158 AYLKEFDSRIIGLTGPVAAIRQMAQEYCFYFKKVEEDGSDYLVDCSHNMYLLNPKMEVTR 217

Query: 694 CFGVEYGAEQLSEEILMEMSKS 759
           CFGVEY AE+LSE I  E++++
Sbjct: 218 CFGVEYNAEELSEVIGKELNRN 239


>ref|XP_004143472.1| PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Cucumis
           sativus] gi|449522672|ref|XP_004168350.1| PREDICTED:
           protein SCO1 homolog 2, mitochondrial-like [Cucumis
           sativus]
          Length = 268

 Score =  280 bits (717), Expect = 3e-73
 Identities = 138/233 (59%), Positives = 172/233 (73%), Gaps = 4/233 (1%)
 Frame = +1

Query: 73  KCNRKITTQNVVPEKP----SDVRSRSWSWVIVPAGLLMIAGVGTVVHYNDERRAVPKGQ 240
           KC+         PE P        S SW+  I+PA ++   G+   VHYNDERRAV KGQ
Sbjct: 35  KCSTSSKYSKERPEVPLLSADGHTSSSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQ 94

Query: 241 GNERAKNTIYGPKFGGPFTLFDTEHHLVTERNLLGNWVLLYFGYTSSPDVGPEEVQKMAK 420
           GN   +N + GP  GGPF+L DTE   VTE++L GNW LLYFGYTSSPDV PE++Q M+K
Sbjct: 95  GNT-CENIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSK 153

Query: 421 VIKTLDSKQNVNLIPIFVTLDPQRDSLSQLRAYLKEFDHRIVGLTGPITAVRQMAQEYRV 600
            I  L+S+    ++PIFVT+DPQRD+ S LRAYLKEFD RI+GLTGP+ AVRQMAQEYRV
Sbjct: 154 AIDILESRHKFKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRV 213

Query: 601 YFKKVEEDGSDYLIDSSHKMYLLQPNMEIVRCFGVEYGAEQLSEEILMEMSKS 759
           YFKKVEE+G+DYLID+SHKMYLL PN+E++RCFG+EY AE++S+ IL  + K+
Sbjct: 214 YFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQKT 266


>ref|XP_002309982.1| predicted protein [Populus trichocarpa] gi|222852885|gb|EEE90432.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  279 bits (714), Expect = 7e-73
 Identities = 130/202 (64%), Positives = 165/202 (81%)
 Frame = +1

Query: 157 VPAGLLMIAGVGTVVHYNDERRAVPKGQGNERAKNTIYGPKFGGPFTLFDTEHHLVTERN 336
           +PA +L  AG+   VHYNDERRAVPKGQG++R    + GP  GGPFTL +TE  +VT ++
Sbjct: 44  IPAAILGFAGLAAFVHYNDERRAVPKGQGSDRGN--VKGPTIGGPFTLINTEDKVVTGKD 101

Query: 337 LLGNWVLLYFGYTSSPDVGPEEVQKMAKVIKTLDSKQNVNLIPIFVTLDPQRDSLSQLRA 516
            LG+WVLLYFGYTSSPDVGPE+++ MAK I TL+SK N+ ++P+FVTLDPQRD+ S LRA
Sbjct: 102 FLGSWVLLYFGYTSSPDVGPEQLKVMAKAINTLESKANLKVLPVFVTLDPQRDNPSHLRA 161

Query: 517 YLKEFDHRIVGLTGPITAVRQMAQEYRVYFKKVEEDGSDYLIDSSHKMYLLQPNMEIVRC 696
           YLKEF+ RIVGLTG + A+RQMAQEYRVYF+K+EE+G DYL++SSH MY + PNME+VRC
Sbjct: 162 YLKEFEPRIVGLTGSVGAIRQMAQEYRVYFRKIEEEGEDYLVESSHDMYFINPNMEVVRC 221

Query: 697 FGVEYGAEQLSEEILMEMSKST 762
           FGVEY AE+LSE I  E+ +++
Sbjct: 222 FGVEYNAEELSEAIQKELKRTS 243