BLASTX nr result

ID: Coptis25_contig00030756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030756
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    58   9e-07
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    57   2e-06
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/102 (32%), Positives = 59/102 (57%)
 Frame = +3

Query: 51  LALQKGLRRINAQTDSNTVVAYLRRREQQPWRAKHLMDEIQELIGRLDVFSVCHVYRETN 230
           L+L  G++ I  ++DS +VV  + R++  P +A   +++I +L+ + D + + H +RETN
Sbjct: 369 LSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWRETN 427

Query: 231 RLADALAATIPTVSYIEIVPSSFSKDVKKIIYEDATGKQYVR 356
           R AD LA      + + + P  F   + +II +DA G +Y R
Sbjct: 428 RAADHLAKMDLLANDVVLSPVDFPPSLSRIIEDDAKGTKYRR 469


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/102 (31%), Positives = 56/102 (54%)
 Frame = +3

Query: 51  LALQKGLRRINAQTDSNTVVAYLRRREQQPWRAKHLMDEIQELIGRLDVFSVCHVYRETN 230
           LA   G++ I  ++DS +VV  + R++    RA   ++ I  L+G+ + + V H +RETN
Sbjct: 216 LASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETN 275

Query: 231 RLADALAATIPTVSYIEIVPSSFSKDVKKIIYEDATGKQYVR 356
           + AD L+    + S + +  + F   +  II +DA G+ Y R
Sbjct: 276 KAADFLSRMDLSGSDVVLGTADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/102 (29%), Positives = 55/102 (53%)
 Frame = +3

Query: 51  LALQKGLRRINAQTDSNTVVAYLRRREQQPWRAKHLMDEIQELIGRLDVFSVCHVYRETN 230
           LAL  G++ I  ++DS + V  + R +    +A   ++ I  L+ + + + V H +RETN
Sbjct: 335 LALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETN 394

Query: 231 RLADALAATIPTVSYIEIVPSSFSKDVKKIIYEDATGKQYVR 356
           + AD L+  +   + + + P  F   ++ II +DA G+ Y R
Sbjct: 395 KAADYLSKMVLERNDVVLWPVHFPTTLQNIIKDDAQGRIYCR 436


Top