BLASTX nr result

ID: Coptis25_contig00030755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030755
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283841.1| PREDICTED: CASP-like protein POPTRDRAFT_8224...    81   8e-14
ref|XP_004147690.1| PREDICTED: CASP-like protein POPTRDRAFT_8224...    76   2e-12
ref|NP_191099.1| uncharacterized protein [Arabidopsis thaliana] ...    76   3e-12
ref|XP_002312083.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002876299.1| integral membrane family protein [Arabidopsi...    75   6e-12

>ref|XP_002283841.1| PREDICTED: CASP-like protein POPTRDRAFT_822486 [Vitis vinifera]
           gi|296086253|emb|CBI31694.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/66 (62%), Positives = 45/66 (68%)
 Frame = +2

Query: 5   PPHFHSTVSLQKLRRFNTLILVXXXXXXXXXXXXTIFMATNSRGSDFPSWRDFHAFRFVL 184
           P HFHSTVS QKLRRFNT+ILV             +FM TNSRGS+ P W DF AFRFV+
Sbjct: 21  PHHFHSTVSAQKLRRFNTVILVFRLASFCFSLAAFVFMLTNSRGSNSPHWYDFDAFRFVV 80

Query: 185 AANAIV 202
            ANAIV
Sbjct: 81  VANAIV 86


>ref|XP_004147690.1| PREDICTED: CASP-like protein POPTRDRAFT_822486-like [Cucumis
           sativus]
          Length = 204

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/66 (60%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +2

Query: 11  HFHSTVSLQKLRRFNTLILVXXXXXXXXXXXXTIFMATNSR--GSDFPSWRDFHAFRFVL 184
           HFHSTVS+QKL+RFN+LILV             +FM TNSR  GSD P W DF AFR+V 
Sbjct: 30  HFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVFMITNSRGSGSDSPRWYDFDAFRYVF 89

Query: 185 AANAIV 202
           AANAIV
Sbjct: 90  AANAIV 95


>ref|NP_191099.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75183229|sp|Q9M2U0.1|CSPLJ_ARATH RecName:
           Full=CASP-like protein At3g55390
           gi|7076782|emb|CAB75897.1| putative protein [Arabidopsis
           thaliana] gi|21594014|gb|AAM65932.1| unknown
           [Arabidopsis thaliana] gi|90567998|gb|ABD94069.1|
           At3g55390 [Arabidopsis thaliana]
           gi|332645857|gb|AEE79378.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 194

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 42/64 (65%)
 Frame = +2

Query: 11  HFHSTVSLQKLRRFNTLILVXXXXXXXXXXXXTIFMATNSRGSDFPSWRDFHAFRFVLAA 190
           HFHSTV+ QKLRRFN+LIL+             +FM TNSRGS  P W DF AFRFV  A
Sbjct: 20  HFHSTVTAQKLRRFNSLILLLRLASFSFSLASAVFMLTNSRGSASPHWYDFDAFRFVFVA 79

Query: 191 NAIV 202
           NAIV
Sbjct: 80  NAIV 83


>ref|XP_002312083.1| predicted protein [Populus trichocarpa]
           gi|288559195|sp|B9HMF8.1|CSPLM_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_820327
           gi|222851903|gb|EEE89450.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 44/64 (68%)
 Frame = +2

Query: 11  HFHSTVSLQKLRRFNTLILVXXXXXXXXXXXXTIFMATNSRGSDFPSWRDFHAFRFVLAA 190
           HFHST+SLQKL+RFN+LILV             +FM TNSRGSD   W +F AFR+V AA
Sbjct: 16  HFHSTISLQKLKRFNSLILVFRFSAFCFSLASAVFMLTNSRGSDSFHWYNFDAFRYVFAA 75

Query: 191 NAIV 202
           NAIV
Sbjct: 76  NAIV 79


>ref|XP_002876299.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322137|gb|EFH52558.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/64 (59%), Positives = 41/64 (64%)
 Frame = +2

Query: 11  HFHSTVSLQKLRRFNTLILVXXXXXXXXXXXXTIFMATNSRGSDFPSWRDFHAFRFVLAA 190
           HFHSTV  QKLRRFN+LIL+             +FM TNSRGS  P W DF AFRFV  A
Sbjct: 20  HFHSTVVAQKLRRFNSLILLLRLASFSFSLASAVFMLTNSRGSGSPHWYDFDAFRFVFVA 79

Query: 191 NAIV 202
           NAIV
Sbjct: 80  NAIV 83


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