BLASTX nr result
ID: Coptis25_contig00030747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030747 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 ref|XP_002533339.1| conserved hypothetical protein [Ricinus comm... 58 9e-07 ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|1... 57 2e-06 >ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|222853275|gb|EEE90822.1| predicted protein [Populus trichocarpa] Length = 227 Score = 58.5 bits (140), Expect = 5e-07 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 14/112 (12%) Frame = +3 Query: 33 CYTAIMDQRASKVTVD-----------DGKNRNYFRSFSQGNSSKPF---NFSVKSLLGL 170 C ++IMD RA K+T + + + Y RS SQG+S + +FS+ SLL L Sbjct: 23 CSSSIMDVRARKITTNNPLATPPNTRVEKRKMEYNRSLSQGSSRRLLTASHFSLVSLLLL 82 Query: 171 VCLTASXXXXXXXXXXXXXXXXXXXXXXIGIFAVLMVLAFMPSDVRNITSSY 326 VCLTAS IGI +LM LAFMPS+ R+IT ++ Sbjct: 83 VCLTASLLILPLVLPPLPPPPFMLLLLPIGILVLLMFLAFMPSNARDITYTW 134 >ref|XP_002533339.1| conserved hypothetical protein [Ricinus communis] gi|223526830|gb|EEF29048.1| conserved hypothetical protein [Ricinus communis] Length = 138 Score = 57.8 bits (138), Expect = 9e-07 Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Frame = +3 Query: 87 KNRNYFRSFSQGNSSKPF----NFSVKSLLGLVCLTASXXXXXXXXXXXXXXXXXXXXXX 254 K Y RS SQG+S + FS++SLL L+CLTAS Sbjct: 54 KKMEYQRSLSQGSSGRRLFPASYFSLESLLLLICLTASLLILPLILPPLPPPPFLLLLLP 113 Query: 255 IGIFAVLMVLAFMPSDVRNITSSYV 329 IGI AVLM+LAFMP++ R+IT +YV Sbjct: 114 IGILAVLMILAFMPANARDITYTYV 138 >ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|118487626|gb|ABK95638.1| unknown [Populus trichocarpa] gi|222874038|gb|EEF11169.1| predicted protein [Populus trichocarpa] Length = 107 Score = 56.6 bits (135), Expect = 2e-06 Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 13/107 (12%) Frame = +3 Query: 48 MDQRASKVTVD----------DGKNRNYFRSFSQGNSSKPF---NFSVKSLLGLVCLTAS 188 MD RA K+T + + K Y RS SQG++ + +FS+ SLL L+C+TAS Sbjct: 1 MDVRARKITANNHRAPPNTSAEEKKIEYNRSLSQGSTRRLLTTSHFSLASLLLLMCITAS 60 Query: 189 XXXXXXXXXXXXXXXXXXXXXXIGIFAVLMVLAFMPSDVRNITSSYV 329 IGI VL+VLAFMPS+ R+IT +YV Sbjct: 61 LLILPLVLAPLPPPPFMLLLLPIGILVVLIVLAFMPSNARDITFAYV 107