BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030741
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    70   2e-10
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              66   3e-09
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          66   3e-09
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    65   4e-09
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]         65   8e-09

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = +2

Query: 2   FWWNGSEGSHSYHTISWDKLCRSKSNGSLGFRKTKDMNHAMISKHCWRMIKDELSKWTLL 181
           FWW+ +  S   H ++WDKLC SKS+G LGFR   D N A+++K  WR+I    S +  +
Sbjct: 609 FWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKV 668

Query: 182 FKKTYPKWQSMID 220
           FK  Y +  + +D
Sbjct: 669 FKGRYFRKSNPLD 681


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/73 (38%), Positives = 43/73 (58%)
 Frame = +2

Query: 2   FWWNGSEGSHSYHTISWDKLCRSKSNGSLGFRKTKDMNHAMISKHCWRMIKDELSKWTLL 181
           FWW+    S   H ++W+KLC SK++G LGFR   D N A+++K  WR+I    S +  +
Sbjct: 675 FWWSSDGESRGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVPDSLFAKV 734

Query: 182 FKKTYPKWQSMID 220
           FK  Y +  + +D
Sbjct: 735 FKGRYFRKSNPLD 747


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   FWWNGSEGSHSYHTISWDKLCRSKSNGSLGFRKTKDMNHAMISKHCWRMIKDELS-KWTL 178
           F+W G       H  SW+KLCRSK NG LGFR+ K+ N AM++K  WR++    S   T+
Sbjct: 65  FYWGGDRNGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATI 124

Query: 179 LFKKTYPK 202
           L  K YP+
Sbjct: 125 LRAKYYPR 132


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 25/65 (38%), Positives = 40/65 (61%)
 Frame = +2

Query: 2   FWWNGSEGSHSYHTISWDKLCRSKSNGSLGFRKTKDMNHAMISKHCWRMIKDELSKWTLL 181
           F W  +      H +SW K+CR K+ G LG R +KDMN A+++K  WR++ D++S W  +
Sbjct: 623 FLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARV 682

Query: 182 FKKTY 196
            ++ Y
Sbjct: 683 LRRKY 687


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +2

Query: 2   FWWNGSEGSHSYHTISWDKLCRSKSNGSLGFRKTKDMNHAMISKHCWRMIKDELSKWTLL 181
           FWW+ +  S   H ++WDK+C SKS G LGFR   + N A+++K  WR+I    S +  +
Sbjct: 79  FWWSSNGESRGMHWMAWDKVCYSKSEGGLGFRSVDNFNSALLAKQLWRLITVPNSLFARV 138

Query: 182 FKKTY 196
           FK  Y
Sbjct: 139 FKGRY 143