BLASTX nr result
ID: Coptis25_contig00030720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030720 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820... 117 1e-24 ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c... 115 5e-24 ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycin... 115 5e-24 ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c... 114 8e-24 >ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|222861864|gb|EEE99406.1| predicted protein [Populus trichocarpa] Length = 374 Score = 117 bits (293), Expect = 1e-24 Identities = 54/63 (85%), Positives = 60/63 (95%) Frame = +2 Query: 2 AFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYR 181 AFE VK RTS+VPFAAILDGRQKLPKDYY+ FLRLPYL+ITA+TLGAY+AHPLMQAAS+R Sbjct: 312 AFEAVKKRTSIVPFAAILDGRQKLPKDYYRXFLRLPYLSITALTLGAYFAHPLMQAASFR 371 Query: 182 LHW 190 LHW Sbjct: 372 LHW 374 >ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max] Length = 374 Score = 117 bits (292), Expect = 1e-24 Identities = 53/62 (85%), Positives = 60/62 (96%) Frame = +2 Query: 5 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 184 FE+VKSRTSVVPFAAILDGRQKLPKD+YKEF+RLPYLT+TA+TLGAY+AHPLMQ AS+ L Sbjct: 313 FELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNL 372 Query: 185 HW 190 HW Sbjct: 373 HW 374 >ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Cucumis sativus] gi|449521697|ref|XP_004167866.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Cucumis sativus] Length = 372 Score = 115 bits (287), Expect = 5e-24 Identities = 52/62 (83%), Positives = 59/62 (95%) Frame = +2 Query: 5 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 184 FE VKSRTS++PFAAI+DGRQKLP DYYKEFLRLPYL+ITA+T+GAY AHPLMQAAS+RL Sbjct: 311 FEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRL 370 Query: 185 HW 190 HW Sbjct: 371 HW 372 >ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycine max] gi|255639319|gb|ACU19957.1| unknown [Glycine max] Length = 369 Score = 115 bits (287), Expect = 5e-24 Identities = 51/62 (82%), Positives = 60/62 (96%) Frame = +2 Query: 5 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 184 FE+V+SRTSVVPFAAILDGRQ+LPKD+YKEF+RLPYLT+T +TLGAY+AHPLMQAAS+ L Sbjct: 308 FELVRSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTVITLGAYFAHPLMQAASFNL 367 Query: 185 HW 190 HW Sbjct: 368 HW 369 >ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis vinifera] Length = 365 Score = 114 bits (285), Expect = 8e-24 Identities = 52/63 (82%), Positives = 59/63 (93%) Frame = +2 Query: 2 AFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYR 181 AF+ V+ RTS++PFAAILDGRQKLPKDYYKEFLRLPYL+IT +TLGAY AHPLMQAAS+R Sbjct: 303 AFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAHPLMQAASFR 362 Query: 182 LHW 190 LHW Sbjct: 363 LHW 365