BLASTX nr result
ID: Coptis25_contig00030714
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030714 (1052 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm... 114 1e-49 emb|CBI22666.3| unnamed protein product [Vitis vinifera] 110 1e-45 ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-l... 105 1e-45 ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun... 108 1e-45 gb|AFK40282.1| unknown [Medicago truncatula] 108 2e-45 >ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis] gi|223547567|gb|EEF49062.1| conserved hypothetical protein [Ricinus communis] Length = 170 Score = 114 bits (284), Expect(2) = 1e-49 Identities = 57/89 (64%), Positives = 72/89 (80%) Frame = -2 Query: 631 QEAELAKEKMNGKLACGRPLVVRFASEKYMVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 452 +EAELAKEKM+G+LACGRPLVVR ASEKY+ EA N +A E K+S G +SGQ+SR+ Sbjct: 69 EEAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRN 128 Query: 451 AKIAAIKNKLKSMEDEGSSLKKPRQGDRI 365 AKIAAIKNKL+++E+EGSS+KK +Q I Sbjct: 129 AKIAAIKNKLRTLEEEGSSVKKQKQSGSI 157 Score = 110 bits (275), Expect(2) = 1e-49 Identities = 47/67 (70%), Positives = 60/67 (89%) Frame = -3 Query: 840 DSDNLFDDKSDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFAF 661 DS+ D+K++ +LY+GN+D +ITEA LIKMFSP+GKIV+ED+LWHTRGPKRGEPRGFAF Sbjct: 3 DSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAF 62 Query: 660 IQFNIKE 640 +QF+ KE Sbjct: 63 VQFSTKE 69 >emb|CBI22666.3| unnamed protein product [Vitis vinifera] Length = 188 Score = 110 bits (274), Expect(2) = 1e-45 Identities = 47/71 (66%), Positives = 60/71 (84%) Frame = -3 Query: 852 CSFMDSDNLFDDKSDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPR 673 CS MD ++L D K + RL+IGN+D +++E LIKMFSPFGKIV ED++WHTRGPKRGEPR Sbjct: 16 CSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPR 75 Query: 672 GFAFIQFNIKE 640 GFAF++F+ KE Sbjct: 76 GFAFVEFSTKE 86 Score = 100 bits (250), Expect(2) = 1e-45 Identities = 51/90 (56%), Positives = 66/90 (73%) Frame = -2 Query: 631 QEAELAKEKMNGKLACGRPLVVRFASEKYMVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 452 +EAELAKEKM+GKL CGRPL VR A+EK ++E + +KSSL G SSGQ+SRS Sbjct: 86 EEAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRS 145 Query: 451 AKIAAIKNKLKSMEDEGSSLKKPRQGDRIT 362 AKIAAIKNKLK ME+E + K+ + D+++ Sbjct: 146 AKIAAIKNKLKEMEEESNGTKRQKVADKVS 175 >ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max] Length = 212 Score = 105 bits (263), Expect(2) = 1e-45 Identities = 45/61 (73%), Positives = 56/61 (91%) Frame = -3 Query: 822 DDKSDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFAFIQFNIK 643 DD+ + RLYIGN+D +ITEA L+KMFSP+GKI++ED+LWHTRGPKRGEPRGFAFIQ++ K Sbjct: 61 DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTK 120 Query: 642 E 640 E Sbjct: 121 E 121 Score = 104 bits (260), Expect(2) = 1e-45 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 2/92 (2%) Frame = -2 Query: 631 QEAELAKEKMNGKLACGRPLVVRFASEKYMVEAEGNQLKAPSEGSKSSLV--GNSSGQVS 458 +EAELAKEKM+G+LACGRPL VR A EK+M+E N KA EG K L G + GQ S Sbjct: 121 EEAELAKEKMHGRLACGRPLFVRLAGEKFMLETADNSTKAAGEGHKMHLTGGGGAMGQTS 180 Query: 457 RSAKIAAIKNKLKSMEDEGSSLKKPRQGDRIT 362 R AKIAAIKNKLKS+E+E S KK ++ D I+ Sbjct: 181 RHAKIAAIKNKLKSLEEESSRSKKQKRSDNIS 212 >ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula] gi|357473041|ref|XP_003606805.1| Polyadenylate-binding protein [Medicago truncatula] gi|355478466|gb|AES59669.1| Polyadenylate-binding protein [Medicago truncatula] gi|355507860|gb|AES89002.1| Polyadenylate-binding protein [Medicago truncatula] Length = 157 Score = 108 bits (270), Expect(2) = 1e-45 Identities = 47/68 (69%), Positives = 59/68 (86%) Frame = -3 Query: 843 MDSDNLFDDKSDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFA 664 MD + DDK + RLY+GN+D +ITEA L+KMFSP+GKI++ED+LWHTRGPKRGEPRGFA Sbjct: 1 MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60 Query: 663 FIQFNIKE 640 FIQ++ KE Sbjct: 61 FIQYSTKE 68 Score = 102 bits (253), Expect(2) = 1e-45 Identities = 52/90 (57%), Positives = 64/90 (71%) Frame = -2 Query: 631 QEAELAKEKMNGKLACGRPLVVRFASEKYMVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 452 +EA LAKEKM+G+LAC RPLVVR A E+Y +E + KA SEG K L G GQ SRS Sbjct: 68 EEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127 Query: 451 AKIAAIKNKLKSMEDEGSSLKKPRQGDRIT 362 AKIAAIKNKLKS+E++ S KK + D ++ Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157 >gb|AFK40282.1| unknown [Medicago truncatula] Length = 157 Score = 108 bits (270), Expect(2) = 2e-45 Identities = 47/68 (69%), Positives = 59/68 (86%) Frame = -3 Query: 843 MDSDNLFDDKSDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFA 664 MD + DDK + RLY+GN+D +ITEA L+KMFSP+GKI++ED+LWHTRGPKRGEPRGFA Sbjct: 1 MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60 Query: 663 FIQFNIKE 640 FIQ++ KE Sbjct: 61 FIQYSTKE 68 Score = 101 bits (252), Expect(2) = 2e-45 Identities = 51/90 (56%), Positives = 64/90 (71%) Frame = -2 Query: 631 QEAELAKEKMNGKLACGRPLVVRFASEKYMVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 452 +EA LAKEKM+G+LAC RPLV+R A E+Y +E + KA SEG K L G GQ SRS Sbjct: 68 EEAILAKEKMHGRLACSRPLVIRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127 Query: 451 AKIAAIKNKLKSMEDEGSSLKKPRQGDRIT 362 AKIAAIKNKLKS+E++ S KK + D ++ Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157