BLASTX nr result

ID: Coptis25_contig00030711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030711
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW77255.1| CLE01 protein [Glycine max]                             59   5e-07
ref|XP_002320476.1| predicted protein [Populus trichocarpa] gi|1...    57   1e-06
ref|XP_003601377.1| hypothetical protein MTR_3g080060 [Medicago ...    56   3e-06

>gb|ADW77255.1| CLE01 protein [Glycine max]
          Length = 71

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/73 (45%), Positives = 42/73 (57%)
 Frame = -3

Query: 238 MDRVHLCLLLAFFILSISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESEKR 59
           M   HL L LA  +L ++P  +A R       +  HQ FHP   +PI     R+  SEKR
Sbjct: 1   MKHFHLFLFLA--LLFLTPRVHAIRIKFSGPSTSSHQDFHPWANSPIRSSREREFMSEKR 58

Query: 58  KVPTGSNPLHNRR 20
           +VPTGSNPLHN+R
Sbjct: 59  RVPTGSNPLHNKR 71


>ref|XP_002320476.1| predicted protein [Populus trichocarpa] gi|118484421|gb|ABK94087.1|
           unknown [Populus trichocarpa]
           gi|222861249|gb|EEE98791.1| predicted protein [Populus
           trichocarpa]
          Length = 74

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -3

Query: 238 MDRVHLCLLLAFFIL--SISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESE 65
           M   HL LLLA  I   S   SS+A+R   F   S   QVF  P         A++ ES+
Sbjct: 1   MKLFHLFLLLALLIFFSSTPRSSHAARRS-FSAPSTSQQVFRSPFRASPFAERAKEFESQ 59

Query: 64  KRKVPTGSNPLHNRR 20
           KRKVPTGSNPLHN+R
Sbjct: 60  KRKVPTGSNPLHNKR 74


>ref|XP_003601377.1| hypothetical protein MTR_3g080060 [Medicago truncatula]
           gi|355490425|gb|AES71628.1| hypothetical protein
           MTR_3g080060 [Medicago truncatula]
          Length = 72

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/73 (41%), Positives = 46/73 (63%)
 Frame = -3

Query: 238 MDRVHLCLLLAFFILSISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESEKR 59
           M + HL LL    +L ++P+SY +R  +F   S   Q FH    +PI+    ++ ES+KR
Sbjct: 3   MKQFHLFLLFTI-LLFLTPTSYTTRT-KFSGPSTQQQAFHRWANSPIS-SRGKEFESQKR 59

Query: 58  KVPTGSNPLHNRR 20
           +VPTG+NPLHN++
Sbjct: 60  RVPTGANPLHNKK 72


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