BLASTX nr result
ID: Coptis25_contig00030711
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030711 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADW77255.1| CLE01 protein [Glycine max] 59 5e-07 ref|XP_002320476.1| predicted protein [Populus trichocarpa] gi|1... 57 1e-06 ref|XP_003601377.1| hypothetical protein MTR_3g080060 [Medicago ... 56 3e-06 >gb|ADW77255.1| CLE01 protein [Glycine max] Length = 71 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/73 (45%), Positives = 42/73 (57%) Frame = -3 Query: 238 MDRVHLCLLLAFFILSISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESEKR 59 M HL L LA +L ++P +A R + HQ FHP +PI R+ SEKR Sbjct: 1 MKHFHLFLFLA--LLFLTPRVHAIRIKFSGPSTSSHQDFHPWANSPIRSSREREFMSEKR 58 Query: 58 KVPTGSNPLHNRR 20 +VPTGSNPLHN+R Sbjct: 59 RVPTGSNPLHNKR 71 >ref|XP_002320476.1| predicted protein [Populus trichocarpa] gi|118484421|gb|ABK94087.1| unknown [Populus trichocarpa] gi|222861249|gb|EEE98791.1| predicted protein [Populus trichocarpa] Length = 74 Score = 57.4 bits (137), Expect = 1e-06 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = -3 Query: 238 MDRVHLCLLLAFFIL--SISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESE 65 M HL LLLA I S SS+A+R F S QVF P A++ ES+ Sbjct: 1 MKLFHLFLLLALLIFFSSTPRSSHAARRS-FSAPSTSQQVFRSPFRASPFAERAKEFESQ 59 Query: 64 KRKVPTGSNPLHNRR 20 KRKVPTGSNPLHN+R Sbjct: 60 KRKVPTGSNPLHNKR 74 >ref|XP_003601377.1| hypothetical protein MTR_3g080060 [Medicago truncatula] gi|355490425|gb|AES71628.1| hypothetical protein MTR_3g080060 [Medicago truncatula] Length = 72 Score = 55.8 bits (133), Expect = 3e-06 Identities = 30/73 (41%), Positives = 46/73 (63%) Frame = -3 Query: 238 MDRVHLCLLLAFFILSISPSSYASRNGRFVDVSKDHQVFHPPVATPITIGEARDMESEKR 59 M + HL LL +L ++P+SY +R +F S Q FH +PI+ ++ ES+KR Sbjct: 3 MKQFHLFLLFTI-LLFLTPTSYTTRT-KFSGPSTQQQAFHRWANSPIS-SRGKEFESQKR 59 Query: 58 KVPTGSNPLHNRR 20 +VPTG+NPLHN++ Sbjct: 60 RVPTGANPLHNKK 72