BLASTX nr result

ID: Coptis25_contig00030709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030709
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280453.2| PREDICTED: putative ABC transporter B family...   239   2e-61
emb|CBI28004.3| unnamed protein product [Vitis vinifera]              239   2e-61
ref|XP_002514211.1| multidrug resistance protein 1, 2, putative ...   226   1e-57
ref|XP_003548594.1| PREDICTED: putative ABC transporter B family...   224   4e-57
ref|XP_003517643.1| PREDICTED: putative ABC transporter B family...   222   3e-56

>ref|XP_002280453.2| PREDICTED: putative ABC transporter B family member 8-like [Vitis
           vinifera]
          Length = 1238

 Score =  239 bits (609), Expect = 2e-61
 Identities = 120/159 (75%), Positives = 133/159 (83%)
 Frame = +3

Query: 3   TFVLSGLSLGMALPDIKYFTEASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEH 182
           +F+L GLSLGMALPD+KYFTEASVAATRIF RIDRIP+IDGED KGLVL  + GELEFEH
Sbjct: 308 SFILGGLSLGMALPDVKYFTEASVAATRIFDRIDRIPEIDGEDDKGLVLDKILGELEFEH 367

Query: 183 VNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXX 362
           VNFTYPSRPD+IVLKDFNLKV AG  VA VGASG GKSTAI+L+QRFY            
Sbjct: 368 VNFTYPSRPDSIVLKDFNLKVQAGKTVALVGASGSGKSTAIALLQRFYDADHGVIRIDGV 427

Query: 363 XXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
             + LQLKW+RGKMGLVSQEHALFGT+IKENI+FGKP+A
Sbjct: 428 DIRTLQLKWIRGKMGLVSQEHALFGTSIKENIIFGKPNA 466



 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
 Frame = +3

Query: 6    FVLSGLSLGMALPDIKYFT----EASVAATRIFQRIDRIPKIDG-----EDMKGLVLKHV 158
            FVL  +S G  + D    T    + S A   +F+ +DR   I G     ++M G  L+ +
Sbjct: 939  FVL--VSTGKVIADAGSMTSDLAKGSTAVASVFEILDRQSLIPGSYNAGDNMAGTKLEKM 996

Query: 159  HGELEFEHVNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXX 338
             G +E + V+F YPSR +++VL+ F L+V  G  +  VG SGCGKST I L+QRFY    
Sbjct: 997  SGGIEIKKVDFAYPSRKESLVLRQFCLEVKPGTSIGLVGKSGCGKSTVIGLIQRFYDADK 1056

Query: 339  XXXXXXXXXXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
                      + L L W R  M LVSQE  ++  +I++NI+FGK DA
Sbjct: 1057 GTVKVDGVDIRELDLGWYRMHMALVSQEPVIYSGSIRDNILFGKLDA 1103


>emb|CBI28004.3| unnamed protein product [Vitis vinifera]
          Length = 1009

 Score =  239 bits (609), Expect = 2e-61
 Identities = 120/159 (75%), Positives = 133/159 (83%)
 Frame = +3

Query: 3   TFVLSGLSLGMALPDIKYFTEASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEH 182
           +F+L GLSLGMALPD+KYFTEASVAATRIF RIDRIP+IDGED KGLVL  + GELEFEH
Sbjct: 260 SFILGGLSLGMALPDVKYFTEASVAATRIFDRIDRIPEIDGEDDKGLVLDKILGELEFEH 319

Query: 183 VNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXX 362
           VNFTYPSRPD+IVLKDFNLKV AG  VA VGASG GKSTAI+L+QRFY            
Sbjct: 320 VNFTYPSRPDSIVLKDFNLKVQAGKTVALVGASGSGKSTAIALLQRFYDADHGVIRIDGV 379

Query: 363 XXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
             + LQLKW+RGKMGLVSQEHALFGT+IKENI+FGKP+A
Sbjct: 380 DIRTLQLKWIRGKMGLVSQEHALFGTSIKENIIFGKPNA 418



 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
 Frame = +3

Query: 6    FVLSGLSLGMALPDIKYFT----EASVAATRIFQRIDRIPKIDG-----EDMKGLVLKHV 158
            FVL  +S G  + D    T    + S A   +F+ +DR   I G     ++M G  L+ +
Sbjct: 710  FVL--VSTGKVIADAGSMTSDLAKGSTAVASVFEILDRQSLIPGSYNAGDNMAGTKLEKM 767

Query: 159  HGELEFEHVNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXX 338
             G +E + V+F YPSR +++VL+ F L+V  G  +  VG SGCGKST I L+QRFY    
Sbjct: 768  SGGIEIKKVDFAYPSRKESLVLRQFCLEVKPGTSIGLVGKSGCGKSTVIGLIQRFYDADK 827

Query: 339  XXXXXXXXXXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
                      + L L W R  M LVSQE  ++  +I++NI+FGK DA
Sbjct: 828  GTVKVDGVDIRELDLGWYRMHMALVSQEPVIYSGSIRDNILFGKLDA 874


>ref|XP_002514211.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223546667|gb|EEF48165.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1230

 Score =  226 bits (577), Expect = 1e-57
 Identities = 112/159 (70%), Positives = 128/159 (80%)
 Frame = +3

Query: 3   TFVLSGLSLGMALPDIKYFTEASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEH 182
           +F+L GLSLGMALPD+KYFTEASVAA RIF RIDR+P+IDGED KGLVL+ + GE+EF+H
Sbjct: 305 SFILGGLSLGMALPDLKYFTEASVAAKRIFNRIDRVPEIDGEDTKGLVLEKMQGEIEFQH 364

Query: 183 VNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXX 362
           V FTYP+RPD+IVLKDFNLK  AG  VA VGASG GKSTAI+LVQRFY            
Sbjct: 365 VRFTYPTRPDSIVLKDFNLKAEAGKTVALVGASGSGKSTAIALVQRFYDVNGGFVKIDGV 424

Query: 363 XXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
             + L LKW+RGKMGLVSQEHALFG +IK+NIMFGK DA
Sbjct: 425 DIRTLNLKWIRGKMGLVSQEHALFGASIKDNIMFGKLDA 463



 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/139 (39%), Positives = 80/139 (57%)
 Frame = +3

Query: 63   EASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEHVNFTYPSRPDTIVLKDFNLK 242
            + S A   +FQ +DR   I  +   G  L+ + G +E + ++F YPSRP+T++L+ F L+
Sbjct: 957  KGSTAVASVFQILDRQSLIPVDGASGTKLEKLTGRIEMKRIDFAYPSRPETLILRQFCLE 1016

Query: 243  VHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXXXXKALQLKWLRGKMGLVSQE 422
            V +G  +  VG SGCGKST I L+QRFY              + L + W R    LVSQE
Sbjct: 1017 VKSGTSIGLVGKSGCGKSTVIGLIQRFYDVERGSVQVDGMDIRELDILWYRRHTALVSQE 1076

Query: 423  HALFGTTIKENIMFGKPDA 479
              L+  +I++NI+FGK DA
Sbjct: 1077 PVLYSGSIRDNIVFGKLDA 1095


>ref|XP_003548594.1| PREDICTED: putative ABC transporter B family member 8-like [Glycine
           max]
          Length = 1290

 Score =  224 bits (572), Expect = 4e-57
 Identities = 110/159 (69%), Positives = 128/159 (80%)
 Frame = +3

Query: 3   TFVLSGLSLGMALPDIKYFTEASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEH 182
           +F++ GLSLG+ LPD+KYFTEASVAA+RIF  IDR P IDGED KG+VL+ + G L+FEH
Sbjct: 305 SFIMCGLSLGVVLPDLKYFTEASVAASRIFDMIDRTPLIDGEDTKGVVLESISGRLDFEH 364

Query: 183 VNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXX 362
           V FTYPSRPD +VL+DFNL+V AG  VA VGASG GKSTAI+LVQRFY            
Sbjct: 365 VKFTYPSRPDMVVLRDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDADEGVVRVDGV 424

Query: 363 XXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
             K+LQLKW+RGKMGLVSQEHA+FGT+IKENIMFGKPDA
Sbjct: 425 DIKSLQLKWMRGKMGLVSQEHAMFGTSIKENIMFGKPDA 463



 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 6    FVLSGLSLGMALPDIKYFT----EASVAATRIFQRIDR---IPKIDGEDMKGLVLKHVHG 164
            FVL  +S G  + D    T    ++S A   +F+ +DR   IPK  G++  G+ L+ + G
Sbjct: 938  FVL--VSTGKVIADAGSMTSDLAKSSTAVASVFEILDRKSLIPKA-GDNNNGIKLEKMSG 994

Query: 165  ELEFEHVNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXX 344
            ++E ++V+F YPSR  T +L+ F L+V  G  V  VG SGCGKST I+L+QRFY      
Sbjct: 995  KIELKNVDFAYPSRVGTPILRKFCLEVKPGKSVGLVGKSGCGKSTVIALIQRFYDVKRGS 1054

Query: 345  XXXXXXXXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
                    + L + W R    LVSQE  ++  +I++NI+FGK DA
Sbjct: 1055 VKVDDVDIRELDIHWHRQHTALVSQEPVIYSGSIRDNILFGKQDA 1099


>ref|XP_003517643.1| PREDICTED: putative ABC transporter B family member 8-like [Glycine
           max]
          Length = 1241

 Score =  222 bits (565), Expect = 3e-56
 Identities = 110/159 (69%), Positives = 126/159 (79%)
 Frame = +3

Query: 3   TFVLSGLSLGMALPDIKYFTEASVAATRIFQRIDRIPKIDGEDMKGLVLKHVHGELEFEH 182
           +F++ GLSLG+ LPD+KYFTEASVAA+RIF  IDR P IDGED KGLVL+ + G L+FEH
Sbjct: 310 SFIMCGLSLGVVLPDLKYFTEASVAASRIFDMIDRTPLIDGEDTKGLVLESISGRLDFEH 369

Query: 183 VNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXXXXXXXX 362
           V FTYPSRPD +VL DFNL+V AG  VA VGASG GKSTAI+LVQRFY            
Sbjct: 370 VKFTYPSRPDMVVLNDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDADEGVVRVDGV 429

Query: 363 XXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
             K+LQLKW+RGKMGLVSQEHA+FGT+IKENIMFGK DA
Sbjct: 430 DIKSLQLKWIRGKMGLVSQEHAMFGTSIKENIMFGKSDA 468



 Score =  111 bits (278), Expect = 5e-23
 Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
 Frame = +3

Query: 6    FVLSGLSLGMALPDIKYFT----EASVAATRIFQRIDR---IPKIDGEDMKGLVLKHVHG 164
            FVL  +S G  + D    T    ++S A   +F+ +DR   IPK  G++  G+ L+ + G
Sbjct: 943  FVL--VSTGKVIADAGSMTSDLAKSSTAVASVFEILDRKSLIPKA-GDNTNGIKLEKMSG 999

Query: 165  ELEFEHVNFTYPSRPDTIVLKDFNLKVHAGMKVAFVGASGCGKSTAISLVQRFYXXXXXX 344
            ++E ++V+F YPSR  T +L+ F L+V  G  V  VG SGCGKST I+L+QRFY      
Sbjct: 1000 KIELKNVDFAYPSRAGTPILRKFCLEVKPGKSVGLVGRSGCGKSTVIALIQRFYDVERGS 1059

Query: 345  XXXXXXXXKALQLKWLRGKMGLVSQEHALFGTTIKENIMFGKPDA 479
                    + L + W R  M LVSQE  ++  +I++NI+FGK DA
Sbjct: 1060 VKVDNVDIRELDIHWYRQHMALVSQEPVIYSGSIRDNILFGKQDA 1104


Top