BLASTX nr result

ID: Coptis25_contig00030701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030701
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32060.3| unnamed protein product [Vitis vinifera]               65   3e-08
ref|XP_003517891.1| PREDICTED: CLAVATA3/ESR (CLE)-related protei...    64   7e-08
ref|XP_003613479.1| hypothetical protein MTR_5g037140 [Medicago ...    64   9e-08
ref|XP_003631289.1| PREDICTED: CLAVATA3/ESR (CLE)-related protei...    61   4e-07
ref|XP_004146759.1| PREDICTED: uncharacterized protein LOC101209...    59   2e-06

>emb|CBI32060.3| unnamed protein product [Vitis vinifera]
          Length = 111

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
 Frame = +3

Query: 294 RRRTMVSIRSTRTGGVMKTLFGAXXXXXXXXXXXXXXXTSGGTLSTRT------ANESFK 455
           + RTM S R     G+ K+LFGA                  G   T +      + E+ K
Sbjct: 4   KERTMGSSR-----GLFKSLFGALAFVGCVWLLLGGGILESGGAKTTSMLAAHYSLENLK 58

Query: 456 RLDVIPRDSHV-----DLNFMSKRKVPNGPDPIHNRRAGKSGATPGRA 584
            + VI R+  V     DLN+MSKR+VPNGPDPIHNRRAG S   PG++
Sbjct: 59  HMKVIDRERLVIRRQLDLNYMSKRRVPNGPDPIHNRRAGNSRQPPGQS 106


>ref|XP_003517891.1| PREDICTED: CLAVATA3/ESR (CLE)-related protein 25-like [Glycine max]
          Length = 108

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
 Frame = +3

Query: 426 STRTANESFKRLDVIPRDSHVD-----LNFMSKRKVPNGPDPIHNRRAGKSGATPGRA 584
           +T+ + E  K   V+ RD  VD      N+MSKR+VPNGPDPIHNRRAG SG  PG+A
Sbjct: 51  TTQWSQERVKHERVVGRDKPVDRAELDFNYMSKRRVPNGPDPIHNRRAGNSGRPPGQA 108


>ref|XP_003613479.1| hypothetical protein MTR_5g037140 [Medicago truncatula]
           gi|355514814|gb|AES96437.1| hypothetical protein
           MTR_5g037140 [Medicago truncatula]
          Length = 124

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 14/72 (19%)
 Frame = +3

Query: 408 TSGGTLSTRT---ANESFKRLD-----------VIPRDSHVDLNFMSKRKVPNGPDPIHN 545
           + GGT  T T   + E+ K  D           V+  D+ +D N+MSKR+VPNGPDPIHN
Sbjct: 52  SGGGTGQTTTRHWSEETLKHDDEQVVVGKDKGVVVNHDAQLDFNYMSKRRVPNGPDPIHN 111

Query: 546 RRAGKSGATPGR 581
           RRAG SG  PG+
Sbjct: 112 RRAGNSGRPPGQ 123


>ref|XP_003631289.1| PREDICTED: CLAVATA3/ESR (CLE)-related protein 25-like [Vitis
           vinifera]
          Length = 65

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
 Frame = +3

Query: 423 LSTRTANESFKRLDVIPRDSHV-----DLNFMSKRKVPNGPDPIHNRRAGKSGATPGRA 584
           L+   + E+ K + VI R+  V     DLN+MSKR+VPNGPDPIHNRRAG S   PG++
Sbjct: 2   LAAHYSLENLKHMKVIDRERLVIRRQLDLNYMSKRRVPNGPDPIHNRRAGNSRQPPGQS 60


>ref|XP_004146759.1| PREDICTED: uncharacterized protein LOC101209880 [Cucumis sativus]
          Length = 104

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 492 LNFMSKRKVPNGPDPIHNRRAGKSGATPGRA 584
           LN+MSKR+VPNGPDPIHNRRAG SG  PG+A
Sbjct: 74  LNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 104


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