BLASTX nr result

ID: Coptis25_contig00030685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030685
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224...   117   1e-24
ref|XP_004141131.1| PREDICTED: uncharacterized protein LOC101203...   117   1e-24
ref|XP_002534290.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_003630963.1| mTERF family protein [Medicago truncatula] g...   113   2e-23
ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab...   110   1e-22

>ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224846 [Cucumis sativus]
          Length = 516

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/64 (82%), Positives = 61/64 (95%)
 Frame = +2

Query: 128 FASDSSKFPEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIM 307
           +++ SSK PEYEMPTVTWG VQGRKEKLVSRVIICDYLK+LGIVPDELEHLELPSTVE+M
Sbjct: 63  YSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVM 122

Query: 308 KEKI 319
           +E++
Sbjct: 123 RERV 126


>ref|XP_004141131.1| PREDICTED: uncharacterized protein LOC101203314 [Cucumis sativus]
          Length = 516

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/64 (82%), Positives = 61/64 (95%)
 Frame = +2

Query: 128 FASDSSKFPEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIM 307
           +++ SSK PEYEMPTVTWG VQGRKEKLVSRVIICDYLK+LGIVPDELEHLELPSTVE+M
Sbjct: 63  YSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVM 122

Query: 308 KEKI 319
           +E++
Sbjct: 123 RERV 126


>ref|XP_002534290.1| conserved hypothetical protein [Ricinus communis]
           gi|223525568|gb|EEF28093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 372

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/65 (78%), Positives = 63/65 (96%)
 Frame = +2

Query: 125 NFASDSSKFPEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEI 304
           +F++ SSKFPEYEMP+VTWGVVQG++EKLV+RVIICDYL NLGI+PDELE+LELPSTVE+
Sbjct: 59  SFSTSSSKFPEYEMPSVTWGVVQGKREKLVNRVIICDYLNNLGIIPDELENLELPSTVEV 118

Query: 305 MKEKI 319
           MKE++
Sbjct: 119 MKERV 123


>ref|XP_003630963.1| mTERF family protein [Medicago truncatula]
           gi|355524985|gb|AET05439.1| mTERF family protein
           [Medicago truncatula]
          Length = 560

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/95 (60%), Positives = 71/95 (74%)
 Frame = +2

Query: 35  YLLKKLLIPNVSISKTMDLFTNAFFNVKVRNFASDSSKFPEYEMPTVTWGVVQGRKEKLV 214
           ++  K L P +S +     F   FFN+    + +  SKFPEYEMPTVTWGV+QGRKEKLV
Sbjct: 4   HIQSKTLFPRISNN-----FRVLFFNL----YGTQDSKFPEYEMPTVTWGVIQGRKEKLV 54

Query: 215 SRVIICDYLKNLGIVPDELEHLELPSTVEIMKEKI 319
           SRVII DYLK LGI+PDEL+ LELPSTVE+M+E++
Sbjct: 55  SRVIIFDYLKGLGIIPDELQDLELPSTVEVMRERV 89


>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
           lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
           ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/114 (48%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
 Frame = +2

Query: 5   IAFRKNSPIQYLLKKLLIPNVSISKTMDL---------FTNAFFNVKVRNFASDSSKFPE 157
           +  R+N  +  + ++ LI  ++ ++T  L         F N     ++ ++A+ SSKFPE
Sbjct: 4   LLLRRNKFLALIRRQSLIFPITSTETKTLINPDPNIPQFQNPCSIFRIAHYATQSSKFPE 63

Query: 158 YEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIMKEKI 319
           YEMPTVTWGV+QG+KEKLV+RV ICDYLK LGI+ DELE +ELPST+E+M E++
Sbjct: 64  YEMPTVTWGVIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERV 117


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