BLASTX nr result

ID: Coptis25_contig00030684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030684
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338651.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002319885.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002337165.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_004159450.1| PREDICTED: uncharacterized LOC101215032 [Cuc...    60   1e-07
ref|XP_004140930.1| PREDICTED: uncharacterized protein LOC101215...    60   1e-07

>ref|XP_002338651.1| predicted protein [Populus trichocarpa] gi|222873080|gb|EEF10211.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
 Frame = -1

Query: 171 RKDIGWDHCA-----SVG--KNHFECNYCKKVLKGGGITRLKQHLAGGYDDVEKCIEVPP 13
           R D+ W HC      SVG  K    C YC KV  GGGI R KQHLAG   +VE+C + PP
Sbjct: 32  RTDLAWGHCREALELSVGCKKTKLVCLYCAKVFAGGGINRFKQHLAGAKGEVEQCRKCPP 91

Query: 12  EAR 4
           + R
Sbjct: 92  DVR 94


>ref|XP_002319885.1| predicted protein [Populus trichocarpa] gi|222858261|gb|EEE95808.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
 Frame = -1

Query: 171 RKDIGWDHCA-----SVG--KNHFECNYCKKVLKGGGITRLKQHLAGGYDDVEKCIEVPP 13
           R D+ W HC      SVG  K    C YC KV  GGGI R KQHLAG   +VE+C + PP
Sbjct: 37  RTDLAWGHCREAPELSVGCKKTKLVCLYCAKVFAGGGINRFKQHLAGAKGEVEQCRKCPP 96

Query: 12  EAR 4
           + R
Sbjct: 97  DVR 99


>ref|XP_002337165.1| predicted protein [Populus trichocarpa] gi|222838393|gb|EEE76758.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
 Frame = -1

Query: 171 RKDIGWDHCA-----SVG--KNHFECNYCKKVLKGGGITRLKQHLAGGYDDVEKCIEVPP 13
           R D+ W HC      SVG  K    C YC KV  GGGI RLKQHLAG   +VE+C + PP
Sbjct: 32  RTDLAWGHCREAPELSVGCKKTKLVCLYCAKVFTGGGINRLKQHLAGAKGEVEQCRKCPP 91

Query: 12  E 10
           +
Sbjct: 92  D 92


>ref|XP_004159450.1| PREDICTED: uncharacterized LOC101215032 [Cucumis sativus]
          Length = 729

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = -1

Query: 174 KRKDIGWDHCASV--GKNHFECNYCKKVLKGGGITRLKQHLAGGYDDVEKCIEVPPEAR 4
           +  D GW H   V  G+   +C YC KV+ GGGI+RLKQHLAG   +V  C EVP E +
Sbjct: 13  RASDPGWAHGIMVNGGRQKIKCKYCNKVMLGGGISRLKQHLAGERGNVAPCEEVPEEVK 71


>ref|XP_004140930.1| PREDICTED: uncharacterized protein LOC101215032 [Cucumis sativus]
          Length = 728

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = -1

Query: 174 KRKDIGWDHCASV--GKNHFECNYCKKVLKGGGITRLKQHLAGGYDDVEKCIEVPPEAR 4
           +  D GW H   V  G+   +C YC KV+ GGGI+RLKQHLAG   +V  C EVP E +
Sbjct: 13  RASDPGWAHGIMVNGGRQKIKCKYCNKVMLGGGISRLKQHLAGERGNVAPCEEVPEEVK 71


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