BLASTX nr result

ID: Coptis25_contig00030675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030675
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]   158   1e-36
ref|XP_002277853.2| PREDICTED: probable disease resistance prote...   155   1e-35
ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855...   147   4e-33
ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus c...   138   1e-30

>emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]
          Length = 1107

 Score =  158 bits (400), Expect = 1e-36
 Identities = 95/226 (42%), Positives = 134/226 (59%), Gaps = 4/226 (1%)
 Frame = +1

Query: 169  HRHAKNLPCRSNVRMVSVNP-TLHVLGLNSWNVNRKEQR---NCGLLRSSWFSCGFCTSV 336
            H   K L CR +    S +  T+      S   N K+ R         S WFS G  +S+
Sbjct: 426  HLSKKYLQCRMDKNFESEDRRTVRSNAPYSSKFNGKKNRILFTYSTYSSRWFSSGVPSSM 485

Query: 337  SSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSCPEL 516
             SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  ++  +  R  PEL
Sbjct: 486  VSSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFELARCGPEL 545

Query: 517  AKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISMLLE 696
            A AWVGVDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V +I+SP I+ + +
Sbjct: 546  AMAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCNNPSLVREILSPIINSIEQ 605

Query: 697  FIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAEHGTSGVA 834
             IE+QL  R+  LV+WF++V+LP + G FIP+L++WS E+  SGVA
Sbjct: 606  NIESQLKARHPKLVEWFRMVELPRIAGFFIPLLKKWSMEYAGSGVA 651


>ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 1639

 Score =  155 bits (392), Expect = 1e-35
 Identities = 83/178 (46%), Positives = 117/178 (65%)
 Frame = +1

Query: 301  SSWFSCGFCTSVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAI 480
            S WFS G  +S+ SS  SD  N E V    KA +  ++++ ++ L  VLH+SARSFS  +
Sbjct: 1007 SMWFSSGVPSSMVSSAYSDQTNNEKVPPQVKAISTKMEFNRVNCLVWVLHESARSFSHTV 1066

Query: 481  KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVH 660
            +     RS PELA AWV VDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V 
Sbjct: 1067 ESFKLARSRPELAMAWVAVDVHAWHKRIAHQVAVYALLRTAIELEFILSHGRCNSPSLVR 1126

Query: 661  DIISPKISMLLEFIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAEHGTSGVA 834
            +I+SP I+ + + IE++L  R+  LV+WF++V+LP + G FIP+L++WS E+  SGVA
Sbjct: 1127 EILSPMINSVKQNIESRLKTRHPKLVEWFRMVELPRIAGFFIPLLKKWSMEYAGSGVA 1184


>ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|222846984|gb|EEE84531.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score =  147 bits (372), Expect = 2e-33
 Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
 Frame = +1

Query: 301 SSWFSCGFCTSVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAI 480
           S + S    +S+SSS  +  IN  N  +V + D+ +++   ++ L  VLH+SA SFS A+
Sbjct: 63  SRYISLKVLSSMSSSASTGEINDVNEAVVSRPDDKNMELTRINCLVWVLHESATSFSQAV 122

Query: 481 KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVH 660
           +  +   S PELA AW G DVH WHK +AYQVAVY +LKT  E +   S +  N  SPV 
Sbjct: 123 ESLELAGSGPELAMAWNGKDVHIWHKRLAYQVAVYALLKTAIEVEILLSHDRHNP-SPVK 181

Query: 661 DIIS--PKISMLLEFIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAEHGTSGVA 834
           ++ S  PKI++L E+IE QL M++  LV+WFK+V+LP + G F P L+QWS E+  SGVA
Sbjct: 182 EMSSFTPKINLLGEYIENQLNMKHPELVQWFKVVELPHIAGFFAPSLKQWSVEYAGSGVA 241


>ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855084 [Vitis vinifera]
          Length = 323

 Score =  147 bits (370), Expect = 4e-33
 Identities = 78/165 (47%), Positives = 111/165 (67%)
 Frame = +1

Query: 340 SSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSCPELA 519
           SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  ++  +  R  PELA
Sbjct: 3   SSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFELARCGPELA 62

Query: 520 KAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISMLLEF 699
            AWVGVDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V +I+SP I+ + + 
Sbjct: 63  MAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCNNPSLVREILSPIINSIEQN 122

Query: 700 IETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAEHGTSGVA 834
           IE+QL  R+  LV+WF++V+LP + G FIP+L++WS E+  SGVA
Sbjct: 123 IESQLKARHPKLVEWFRMVELPRIAGFFIPLLKKWSMEYAGSGVA 167


>ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus communis]
           gi|223544900|gb|EEF46415.1| hypothetical protein
           RCOM_1491960 [Ricinus communis]
          Length = 740

 Score =  138 bits (348), Expect = 1e-30
 Identities = 72/169 (42%), Positives = 112/169 (66%)
 Frame = +1

Query: 328 TSVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSC 507
           + VSS+   ++  V +  +  K DN +++++ ++ L  VLH+SA SFS+A++      S 
Sbjct: 70  SGVSSTSGEENDGVSSAAVA-KVDNNEIEFNRINCLVWVLHESAASFSLAVQSLGLPGSG 128

Query: 508 PELAKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISM 687
            ELA AW G DVH WHK IAYQVA Y +LKT  E +   S +  +  S V  I++PKI++
Sbjct: 129 AELAMAWNGKDVHEWHKIIAYQVAAYALLKTAIEVESLLSLDRHHNASLVKKILTPKINL 188

Query: 688 LLEFIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAEHGTSGVA 834
           + E+IE QL +++ +LV+WF++V+LP + G FIP+L++WS E+  SGVA
Sbjct: 189 MEEYIEGQLKLKHEDLVEWFRVVELPHIAGFFIPLLKKWSMEYAGSGVA 237


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