BLASTX nr result

ID: Coptis25_contig00030666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030666
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|1...    56   3e-06

>ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|118484370|gb|ABK94062.1|
           unknown [Populus trichocarpa]
           gi|222861406|gb|EEE98948.1| predicted protein [Populus
           trichocarpa]
          Length = 80

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
 Frame = +1

Query: 46  HHFSTDSPLVLEMKKVINEKMKKACEVTKASSGRFVATQHNGSDGNVPT--SKKIERRV- 216
           H+ S+D  L  + K+ I E++K+A +    S       ++   +GN     SK+IERR  
Sbjct: 4   HNLSSDGSLPRDAKRTIAERLKQAIDAATVS---MTMARNGAGEGNSALLYSKEIERRNW 60

Query: 217 SSNGEDPIRIVMFLGSWSHT 276
           SS  EDPIR +MFLGSW HT
Sbjct: 61  SSQAEDPIRTMMFLGSWGHT 80


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