BLASTX nr result

ID: Coptis25_contig00030648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030648
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243...    59   3e-07
emb|CAN81932.1| hypothetical protein VITISV_041503 [Vitis vinifera]    59   3e-07
emb|CBI20392.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243528 [Vitis vinifera]
          Length = 361

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
 Frame = +1

Query: 4   NSQVHVQF-GVQPVQLQPPSQKNVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQ 180
           N QV  QF   Q   LQ   Q+   C T S   TPFL++ QLMQA  E    +PT F+YQ
Sbjct: 196 NPQVQNQFESFQGNNLQSSIQEVQACPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQ 255

Query: 181 NTEPIVWEQNA----EGIEDYAPQLDYGYFNQSIVDLLNENQNIDSNDNQNF 324
           N+ P +W+ +            P L +     SI        N  SN+ QNF
Sbjct: 256 NSLPNLWQVHGGHPITAASFTNPTLSFDSIPSSITGHQTLKSNAVSNNTQNF 307


>emb|CAN81932.1| hypothetical protein VITISV_041503 [Vitis vinifera]
          Length = 335

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
 Frame = +1

Query: 4   NSQVHVQF-GVQPVQLQPPSQKNVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQ 180
           N QV  QF   Q   LQ   Q+   C T S   TPFL++ QLMQA  E    +PT F+YQ
Sbjct: 196 NPQVQNQFESFQGNNLQSSIQEVQACPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQ 255

Query: 181 NTEPIVWEQNA----EGIEDYAPQLDYGYFNQSIVDLLNENQNIDSNDNQNF 324
           N+ P +W+ +            P L +     SI        N  SN+ QNF
Sbjct: 256 NSLPNLWQVHGGHPITAASFTNPTLSFDSIPSSITGHQTLKSNAVSNNTQNF 307


>emb|CBI20392.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
 Frame = +1

Query: 46  LQPPSQKNVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTEPIVWEQNA---- 213
           LQ   Q+   C T S   TPFL++ QLMQA  E    +PT F+YQN+ P +W+ +     
Sbjct: 191 LQSSIQEVQACPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPI 250

Query: 214 EGIEDYAPQLDYGYFNQSIVDLLNENQNIDSNDNQNF 324
                  P L +     SI        N  SN+ QNF
Sbjct: 251 TAASFTNPTLSFDSIPSSITGHQTLKSNAVSNNTQNF 287


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