BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030628
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   134   8e-30
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   130   8e-29
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   130   8e-29
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   130   1e-28

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/123 (55%), Positives = 91/123 (73%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   YAVAGKPDIALKLFGAMRFHGTDLDPFAYHVLLNALVEQSRFEFVQVVLKQLELRGFENE 180
           YAVAGKP+IAL+LF  MRF G DLD FAYHVLLNALVE++ F+  +VV++Q+ +RG +NE
Sbjct: 186 YAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQIRMRGLDNE 245

Query: 181 VTLCLRVKNYCKQNKLREAVFYLRRLQSRGDV--VNDHMVGLLVDAHCKKNKFEGAHRLM 354
           +T  + VKN+CKQ +L EA  ++ +L   G V     HMVGL+VDA CK+ +F  A RL+
Sbjct: 246 ITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRKRFGEAGRLV 305

Query: 355 EDF 363
           E+F
Sbjct: 306 EEF 308


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/123 (55%), Positives = 91/123 (73%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   YAVAGKPDIALKLFGAMRFHGTDLDPFAYHVLLNALVEQSRFEFVQVVLKQLELRGFENE 180
           YAVAGKP+IAL+LF  MRF G DLD FAYHVLLNALVE++ F+  +VV++Q+ +RG +NE
Sbjct: 186 YAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQIRMRGLDNE 245

Query: 181 VTLCLRVKNYCKQNKLREAVFYLRRLQSRGDV--VNDHMVGLLVDAHCKKNKFEGAHRLM 354
           +T  + VKN+CKQ +L EA  ++ +L   G V     HMVGL+VDA CK+ +F  A RL+
Sbjct: 246 ITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRKRFGEAGRLV 305

Query: 355 EDF 363
           E+F
Sbjct: 306 EEF 308


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  130 bits (328), Expect = 8e-29
 Identities = 66/121 (54%), Positives = 85/121 (70%)
 Frame = +1

Query: 1   YAVAGKPDIALKLFGAMRFHGTDLDPFAYHVLLNALVEQSRFEFVQVVLKQLELRGFENE 180
           YA AGKP  AL LFG MRF G DLDPF+YHVLLN+LVE++ F+ V V++KQ+ LRGF NE
Sbjct: 188 YAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENCFDAVNVIIKQITLRGFVNE 247

Query: 181 VTLCLRVKNYCKQNKLREAVFYLRRLQSRGDVVNDHMVGLLVDAHCKKNKFEGAHRLMED 360
           +T  L +K++CKQN+L EA  +L  L   G  +N  M+ LLV A C+   FE A +L+E 
Sbjct: 248 ITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFCQSGNFERAWKLVEW 307

Query: 361 F 363
           F
Sbjct: 308 F 308


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Cucumis sativus]
          Length = 913

 Score =  130 bits (328), Expect = 8e-29
 Identities = 66/121 (54%), Positives = 85/121 (70%)
 Frame = +1

Query: 1   YAVAGKPDIALKLFGAMRFHGTDLDPFAYHVLLNALVEQSRFEFVQVVLKQLELRGFENE 180
           YA AGKP  AL LFG MRF G DLDPF+YHVLLN+LVE++ F+ V V++KQ+ LRGF NE
Sbjct: 212 YAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENCFDAVNVIIKQITLRGFVNE 271

Query: 181 VTLCLRVKNYCKQNKLREAVFYLRRLQSRGDVVNDHMVGLLVDAHCKKNKFEGAHRLMED 360
           +T  L +K++CKQN+L EA  +L  L   G  +N  M+ LLV A C+   FE A +L+E 
Sbjct: 272 ITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFCQSGNFERAWKLVEW 331

Query: 361 F 363
           F
Sbjct: 332 F 332


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/121 (52%), Positives = 88/121 (72%)
 Frame = +1

Query: 1   YAVAGKPDIALKLFGAMRFHGTDLDPFAYHVLLNALVEQSRFEFVQVVLKQLELRGFENE 180
           Y+VAGKP +AL+LFG MRF G DLD FAYH+LLN+LVE+  F+ V  + KQ+ +RGFE+ 
Sbjct: 202 YSVAGKPQVALQLFGKMRFLGRDLDAFAYHILLNSLVEECCFDAVDDIAKQISIRGFESH 261

Query: 181 VTLCLRVKNYCKQNKLREAVFYLRRLQSRGDVVNDHMVGLLVDAHCKKNKFEGAHRLMED 360
           +T  + VK++CKQ  L EA  YLRR+  +G+  N   VG+LV A C+K +FE A +L+E+
Sbjct: 262 ITHSIVVKSFCKQRMLDEAEAYLRRMILQGESGNGAAVGILVGAFCQKGQFEKAGQLIEE 321

Query: 361 F 363
           F
Sbjct: 322 F 322