BLASTX nr result

ID: Coptis25_contig00030614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030614
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   246   4e-63
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   244   1e-62
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-57
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...   225   7e-57
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              214   2e-53

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  246 bits (628), Expect = 4e-63
 Identities = 142/266 (53%), Positives = 179/266 (67%), Gaps = 3/266 (1%)
 Frame = -2

Query: 791  FVLYDIMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQND-SYDAVNDQHQT 615
            FVLYDI HAR+++ A+ +S     S +A + A G N  + G   E +D S DAV  + QT
Sbjct: 442  FVLYDIAHARKSITARENS---CHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQT 498

Query: 614  GHASATDNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRESLKDKQVDKLGAKEQKNLF 435
             HAS  D+FD +  YPWAPA+LHP+LEIAAIVIQVPFEKRESLK ++ +K   K   +  
Sbjct: 499  NHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFL 558

Query: 434  DFSAFDHRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWD 255
            D S  + +  D    +S A VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWD
Sbjct: 559  DLSMVEQKKKD-VLDMSPAKVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWD 616

Query: 254  MACPLHVFDNCE-EKMKD-RYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARL 81
            MACPL VFDN    +++D   M + QP+ELF QGAK+++ A+TI    EGQY+VDFHA+L
Sbjct: 617  MACPLIVFDNPSILRVEDCPLMESPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQL 676

Query: 80   SKLQAFSICVAILHGCEASTAIEQEK 3
            S LQAFSICVA+LH  EA +    EK
Sbjct: 677  STLQAFSICVAMLHSSEAFSTTGDEK 702


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  244 bits (624), Expect = 1e-62
 Identities = 141/266 (53%), Positives = 175/266 (65%), Gaps = 3/266 (1%)
 Frame = -2

Query: 791  FVLYDIMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQND-SYDAVNDQHQT 615
            FVLYDI HAR+++ A+ +S     S +A + A G N  + G   E +D S DAV  + QT
Sbjct: 621  FVLYDIAHARKSITARENS---CHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQT 677

Query: 614  GHASATDNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRESLKDKQVDKLGAKEQKNLF 435
             HAS  D+FD +  YPWAPA+LHP+LEIAAIVIQVPFEKRESLK ++ +K   K   +  
Sbjct: 678  NHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFL 737

Query: 434  DFSAFDHRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWD 255
            D S  + +  D    +S A VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWD
Sbjct: 738  DLSMVEQKKKD-VLDMSPAKVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWD 795

Query: 254  MACPLHVFDNCEEKMKD--RYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARL 81
            MACPL VFDN      +    M   QP+ELF QGAK+++ A+TI    EGQY+VDFHA+L
Sbjct: 796  MACPLIVFDNPSILXVEDCPLMEXPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQL 855

Query: 80   SKLQAFSICVAILHGCEASTAIEQEK 3
            S LQAFSICVA+LH  EA +    EK
Sbjct: 856  STLQAFSICVAMLHSSEAFSTTGDEK 881


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
            predicted protein [Populus trichocarpa]
          Length = 737

 Score =  226 bits (577), Expect = 3e-57
 Identities = 129/267 (48%), Positives = 164/267 (61%), Gaps = 4/267 (1%)
 Frame = -2

Query: 791  FVLYDIMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQNDSYDAVNDQHQTG 612
            FV+YDI HAR  +  ++S D        ++  +  N  + G   E   + DAV  +HQ  
Sbjct: 426  FVMYDIAHARHRVSTEDSPD--------VRPDSSANPGLVGGSHEMGGNSDAVKLKHQPK 477

Query: 611  HASATDNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRESLKDKQVDKLGAKEQKNLFD 432
            +A    +FD S  YP A A LHP+LEIAA+VIQ+PF KRESLK K+ DK   +   NL +
Sbjct: 478  YAFDRGHFDSSNPYPSASAVLHPDLEIAAVVIQLPFAKRESLKYKRGDKGSDEMHSNLLN 537

Query: 431  FSAFDHRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDM 252
             S  + R    P   +  NVKVV PT  H LPS  S G PS +L+RWRSGG CDCGGWDM
Sbjct: 538  LSVGEQRRKTIPDKENPENVKVVIPTGNHSLPSGDSRG-PSSLLDRWRSGGGCDCGGWDM 596

Query: 251  ACPLHVFDN----CEEKMKDRYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHAR 84
            ACPL VF N    C E   +  + NQ+P+ELF  G K+ + A+T+    EGQY+VDFHA+
Sbjct: 597  ACPLTVFGNPGIQCAE--DEPLLDNQRPLELFLMGTKENIPALTMTVLEEGQYAVDFHAQ 654

Query: 83   LSKLQAFSICVAILHGCEASTAIEQEK 3
            LS LQAFSICVAILHG EA+    +E+
Sbjct: 655  LSTLQAFSICVAILHGTEATGVTREER 681


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
            gi|223549704|gb|EEF51192.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 736

 Score =  225 bits (574), Expect = 7e-57
 Identities = 129/268 (48%), Positives = 167/268 (62%), Gaps = 5/268 (1%)
 Frame = -2

Query: 791  FVLYDIMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQNDSYDAVNDQHQTG 612
            FVLYDI HAR+++  Q+ +D +    +   G+  E   +       N+  + +  +H + 
Sbjct: 421  FVLYDIAHARQSVSTQDPADIIEPPSDFKPGSFCETQKL-------NNGSEPIKLKHHSK 473

Query: 611  HASATDNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRESLKDKQVDKLGAKEQKNLFD 432
             A  T N D S  YPW  A LH +LEIAAIV+Q+PF KRESLK K+ DK   K  +NL +
Sbjct: 474  RAFDTGNIDSSNPYPWPSAVLHADLEIAAIVVQLPFAKRESLKYKRGDKSSDKAHRNLLN 533

Query: 431  FSAFDH-RNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWD 255
             S  +H R     S  S   +KVV PT  H LP  ++ G PS +L RWRSGG CDCGGWD
Sbjct: 534  NSMNEHGRKGGFTSRESPEKLKVVIPTGNHSLPIDENQG-PSSLLNRWRSGGGCDCGGWD 592

Query: 254  MACPLHVFD----NCEEKMKDRYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHA 87
            MACPL VF     NC E +    + NQQP+ELF QG K K+ A+T++   EG+Y+VDFHA
Sbjct: 593  MACPLTVFGSPSINCAEDVL--LIDNQQPLELFVQGTKQKIPALTMRIVEEGKYAVDFHA 650

Query: 86   RLSKLQAFSICVAILHGCEASTAIEQEK 3
            +LS LQAFSICVAILHG EAS++  +EK
Sbjct: 651  QLSTLQAFSICVAILHGAEASSSTGEEK 678


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  214 bits (544), Expect = 2e-53
 Identities = 128/247 (51%), Positives = 155/247 (62%), Gaps = 3/247 (1%)
 Frame = -2

Query: 734  DSLTKSVEAIKGATGENLVVEGIPCEQND-SYDAVNDQHQTGHASATDNFDVSPHYPWAP 558
            D    +  A + A G N  + G   E +D S DAV  + QT HAS  D+FD +  YPWAP
Sbjct: 811  DFANTTQHAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAP 870

Query: 557  ADLHPNLEIAAIVIQVPFEKRESLKDKQVDKLGAKEQKNLFDFSAFDHRNNDNPSGVSRA 378
            A+LHP+LEIAAIVIQVPFEKRESLK                      +R  +NP     A
Sbjct: 871  ANLHPDLEIAAIVIQVPFEKRESLK----------------------YRRGENP-----A 903

Query: 377  NVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACPLHVFDNCE-EKMKD- 204
             VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWDMACPL VFDN    +++D 
Sbjct: 904  KVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDC 962

Query: 203  RYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSKLQAFSICVAILHGCEAS 24
              M + QP+ELF QGAK+++ A+TI    EGQY+VDFHA+LS LQAFSICVA+LH  EA 
Sbjct: 963  PLMESPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAF 1022

Query: 23   TAIEQEK 3
            +    EK
Sbjct: 1023 STTGDEK 1029


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