BLASTX nr result

ID: Coptis25_contig00030601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030601
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31438.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002273747.1| PREDICTED: probable lysine-specific demethyl...   202   2e-50
ref|XP_003535524.1| PREDICTED: probable lysine-specific demethyl...   201   7e-50
ref|XP_003591873.1| Zinc finger protein [Medicago truncatula] gi...   199   2e-49
ref|XP_003555439.1| PREDICTED: probable lysine-specific demethyl...   199   3e-49

>emb|CBI31438.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  202 bits (515), Expect = 2e-50
 Identities = 88/150 (58%), Positives = 108/150 (72%)
 Frame = -3

Query: 451  FFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXKQPSASAAGKEKKLKMREVHRCDI 272
            F +SPCEGLRPR  +  ++   +             K    S   K+KK   +  HRCD+
Sbjct: 1215 FIRSPCEGLRPRAKKDGSTGADTNKPVVEKPMAKTRKPADTSGPHKDKKENTKGSHRCDL 1274

Query: 271  ENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCPWKGCTMSF 92
            E C MSFKT+  L++HKR++C H+GCGK+F SHKYA+LHQRVH DERPLKCPWKGC+MSF
Sbjct: 1275 EGCRMSFKTKAELLLHKRNRCPHEGCGKKFSSHKYAMLHQRVHDDERPLKCPWKGCSMSF 1334

Query: 91   KWAWARTEHLRVHTGERPYQCKIEGCDLTF 2
            KWAWARTEH+RVHTG RPYQCK+EGC L+F
Sbjct: 1335 KWAWARTEHVRVHTGARPYQCKVEGCGLSF 1364


>ref|XP_002273747.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Vitis
            vinifera]
          Length = 1415

 Score =  202 bits (515), Expect = 2e-50
 Identities = 88/150 (58%), Positives = 108/150 (72%)
 Frame = -3

Query: 451  FFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXKQPSASAAGKEKKLKMREVHRCDI 272
            F +SPCEGLRPR  +  ++   +             K    S   K+KK   +  HRCD+
Sbjct: 1244 FIRSPCEGLRPRAKKDGSTGADTNKPVVEKPMAKTRKPADTSGPHKDKKENTKGSHRCDL 1303

Query: 271  ENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCPWKGCTMSF 92
            E C MSFKT+  L++HKR++C H+GCGK+F SHKYA+LHQRVH DERPLKCPWKGC+MSF
Sbjct: 1304 EGCRMSFKTKAELLLHKRNRCPHEGCGKKFSSHKYAMLHQRVHDDERPLKCPWKGCSMSF 1363

Query: 91   KWAWARTEHLRVHTGERPYQCKIEGCDLTF 2
            KWAWARTEH+RVHTG RPYQCK+EGC L+F
Sbjct: 1364 KWAWARTEHVRVHTGARPYQCKVEGCGLSF 1393


>ref|XP_003535524.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
            max]
          Length = 1499

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/159 (56%), Positives = 117/159 (73%), Gaps = 4/159 (2%)
 Frame = -3

Query: 466  SSCNRFFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXKQPSASAAG----KEKKLK 299
            S+ + F +SPCEGLRPR  + AT  +G  +           K+   S+ G    K KK  
Sbjct: 1321 SNIDNFIRSPCEGLRPRAGKIATDKSGV-EINQVDKENQVAKRARRSSEGLVPHKNKKDD 1379

Query: 298  MREVHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKC 119
            +++ H+CD++ C+MSFKT+  L++HKR+ C H+GCGK+F SHKYA+LHQRVH DERPLKC
Sbjct: 1380 VKKPHKCDLDGCQMSFKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKC 1439

Query: 118  PWKGCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTF 2
            PWKGC+MSFKWAWARTEH+RVHTGE+PY CK+EGC L+F
Sbjct: 1440 PWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSF 1478


>ref|XP_003591873.1| Zinc finger protein [Medicago truncatula] gi|355480921|gb|AES62124.1|
            Zinc finger protein [Medicago truncatula]
          Length = 1586

 Score =  199 bits (506), Expect = 2e-49
 Identities = 89/156 (57%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
 Frame = -3

Query: 460  CNRFFKSPCEGLRPRTSRTAT--SVTGSGDXXXXXXXXXXXKQPS-ASAAGKEKKLKMRE 290
            C  F +SPCE LRPRT +TAT  SV  +             ++P+ AS   K+KK  ++ 
Sbjct: 1410 CYDFIRSPCERLRPRTGKTATGKSVGDNSQNDEENRVAKRTRKPAEASIPRKDKKSNVKR 1469

Query: 289  VHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCPWK 110
             H+CD++NC MSF T+  L +HKR+ C H+GCGK+F SHKYA++HQRVH D+RP KC WK
Sbjct: 1470 PHKCDLDNCRMSFTTKAELQLHKRNLCPHEGCGKKFSSHKYALIHQRVHEDDRPFKCTWK 1529

Query: 109  GCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTF 2
            GC+MSFKW+WARTEHLRVHTGE+PYQCK+EGC L+F
Sbjct: 1530 GCSMSFKWSWARTEHLRVHTGEKPYQCKVEGCGLSF 1565


>ref|XP_003555439.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
            max]
          Length = 1481

 Score =  199 bits (505), Expect = 3e-49
 Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
 Frame = -3

Query: 466  SSCNRFFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXKQPSASAA---GKEKKLKM 296
            S+C+ F +SPCEGLRPR  + A   +G              +   +S A    K KK  +
Sbjct: 1303 SNCDNFIRSPCEGLRPRAGKIAADKSGVEINQVDKENQVAKRARRSSEALVPRKNKKDDV 1362

Query: 295  REVHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCP 116
            ++ H+CD++ C MSFKT+  L +HKR+ C H+GCGK+F SHKYA+LHQRVH D+RPLKCP
Sbjct: 1363 KKPHKCDLDGCRMSFKTKAELQLHKRNLCPHEGCGKKFSSHKYALLHQRVHNDDRPLKCP 1422

Query: 115  WKGCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTF 2
            WKGC+MSFKWAWARTEH+RVHTGE+PY CK+EGC L+F
Sbjct: 1423 WKGCSMSFKWAWARTEHMRVHTGEKPYHCKVEGCGLSF 1460


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