BLASTX nr result

ID: Coptis25_contig00030593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030593
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36269.1| unknown [Lotus japonicus]                              137   9e-31
ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258...   137   1e-30
ref|XP_002532565.1| oxidoreductase, putative [Ricinus communis] ...   135   5e-30
ref|XP_002869585.1| NADH:ubiquinone oxidoreductase family protei...   134   8e-30
ref|XP_002304472.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29

>gb|AFK36269.1| unknown [Lotus japonicus]
          Length = 183

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/78 (79%), Positives = 69/78 (88%)
 Frame = +1

Query: 22  MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 201
           M ++F RIAGLFS++ F GVDKAGNKYFTRK  IDG++KEKRWVIFKGEEDPTS+PVEWI
Sbjct: 1   MRRVFGRIAGLFSNRNFEGVDKAGNKYFTRKEQIDGSMKEKRWVIFKGEEDPTSIPVEWI 60

Query: 202 CWLNGQRKIAPTPEEMAE 255
            WLNGQRK APTPEEM E
Sbjct: 61  SWLNGQRKKAPTPEEMME 78


>ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258888 [Vitis vinifera]
           gi|297737442|emb|CBI26643.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  137 bits (344), Expect = 1e-30
 Identities = 59/78 (75%), Positives = 68/78 (87%)
 Frame = +1

Query: 22  MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 201
           MSKL SRIAG FSS+T  G DK GN+YF RK ++DG +KEKRWV+FKGE+DPTS+PVEWI
Sbjct: 1   MSKLLSRIAGFFSSRTMVGADKVGNRYFIRKEEVDGIMKEKRWVVFKGEKDPTSIPVEWI 60

Query: 202 CWLNGQRKIAPTPEEMAE 255
           CWLNGQRK+APTPEEM E
Sbjct: 61  CWLNGQRKVAPTPEEMIE 78


>ref|XP_002532565.1| oxidoreductase, putative [Ricinus communis]
           gi|223527720|gb|EEF29826.1| oxidoreductase, putative
           [Ricinus communis]
          Length = 156

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = +1

Query: 22  MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 201
           MSKLF+RI+G FSS+TF G DKAG++YFTR  +IDG +KEKRWV+F+GE+DPTS+PVEWI
Sbjct: 1   MSKLFARISGFFSSRTFVGNDKAGSRYFTRTEEIDGIMKEKRWVVFRGEDDPTSIPVEWI 60

Query: 202 CWLNGQRKIAPTPEEMAE 255
           CWLNGQRK APTPEEM E
Sbjct: 61  CWLNGQRKKAPTPEEMIE 78


>ref|XP_002869585.1| NADH:ubiquinone oxidoreductase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315421|gb|EFH45844.1|
           NADH:ubiquinone oxidoreductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = +1

Query: 22  MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 201
           MS+L++R+AGLFSSK+F GVDK GNKYF+R  +IDG +KEKRWV+F+ EEDPTS+PVEWI
Sbjct: 1   MSRLWARVAGLFSSKSFIGVDKTGNKYFSRMEEIDGLVKEKRWVVFRREEDPTSIPVEWI 60

Query: 202 CWLNGQRKIAPTPEEMAE 255
           CWLNGQRK APTPEEM E
Sbjct: 61  CWLNGQRKRAPTPEEMVE 78


>ref|XP_002304472.1| predicted protein [Populus trichocarpa] gi|222841904|gb|EEE79451.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  131 bits (329), Expect = 7e-29
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +1

Query: 22  MSKLFSRIAGLFSSKTFAGVDKAGNKYFTRKHDIDGNLKEKRWVIFKGEEDPTSVPVEWI 201
           MSKL +RIAG  S++T  GVDK GN+YFTR  +IDG +KEKRWV+FKGEEDPTS+PVEWI
Sbjct: 1   MSKLLARIAGYLSNRTLVGVDKVGNRYFTRTEEIDGIMKEKRWVVFKGEEDPTSLPVEWI 60

Query: 202 CWLNGQRKIAPTPEEMAE 255
           CWLNGQRK APTPEE+ E
Sbjct: 61  CWLNGQRKRAPTPEELIE 78


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